DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cas and Casz1

DIOPT Version :9

Sequence 1:NP_524677.1 Gene:cas / 44018 FlyBaseID:FBgn0004878 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_008762539.1 Gene:Casz1 / 313713 RGDID:1563533 Length:1889 Species:Rattus norvegicus


Alignment Length:766 Identity:231/766 - (30%)
Similarity:323/766 - (42%) Gaps:165/766 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 QNTNCSSSRSCSPNSNLIAFQPQQYPGATAATPSTPNSHPSNLVNQMLLQSLPPLTQLMLQQQQQ 147
            |||....:|.       |:|: :.:.|:|          |..:.:.||..|...|::.....:.:
  Rat   216 QNTRDELARK-------ISFE-KLHAGST----------PEVVASSMLPSSEDTLSKRARFSKYE 262

  Fly   148 QHL--LTTSNLLLTPTHTPSSLGKQDPLQHPLLLGQFAGSEQMATNNFLQSSTVTSTPIEREKAA 210
            :::  |.....|..|.|...:..:             ||.|.:..   |.|..:.|.....|..|
  Rat   263 EYIRKLKAGEQLPWPAHGSKAEDR-------------AGKEVVGP---LPSLRLPSNTAHLETKA 311

  Fly   211 T--PAPS-AGATAGNLSAAQVKFEQESADDDEDDDKPLSSLTSCSS----SGHTNASSEKLLLSG 268
            |  |.|| :.....||.|...|:           |..:..|.:..|    :|.|.....|..|..
  Rat   312 TILPLPSHSSVQMQNLVARASKY-----------DFFIHKLKTGESLRPQNGSTYKKPSKYDLEN 365

  Fly   269 VHPLESTTDSLDSPSM-----YTPVKQPADSSY---GLITPVDSDLTPNTPLQPTQTISLLTPPS 325
            |..|........||.|     :...|....|.|   |:..|..:.:.|...|.||...::.:.||
  Rat   366 VKYLHLFKPGEGSPDMGGAIAFKTGKVGRPSKYDVRGIQKPGTTKIPPAPSLVPTPLTNVPSAPS 430

  Fly   326 S----------------EQSKSLVSL--SAASGLDALLQN----------EEV---LKNLRKVSS 359
            :                |..||..|.  |..:|..:.::|          |:|   .|.:.:.|.
  Rat   431 APGPGPEPPASLSFNTPEYLKSTFSKTDSITTGTVSTVKNGLPTDKPAVTEDVNIYQKYIARFSG 495

  Fly   360 YLECENSLCRQENLREHFHCHEEPCQGKILSKKDDIIRHLKWHKKRKESLKLGFARFSSSDDCAP 424
            ...|.:..|..: .|||:||.:..|..:..:.|.|:|||...||||..||:.||.|||..|||: 
  Rat   496 SQHCGHIHCAYQ-YREHYHCLDPECNYQRFTSKQDVIRHYNMHKKRDNSLQHGFMRFSPLDDCS- 558

  Fly   425 AYGEGCAYNWKQTHYHCVYEHCPKVYVSTSDVQMHANFHRKDSEIVNEGFRRFRAHETCRIEDCP 489
            .|..||..|.|.|||||:...|.|||.|||||..|.|||:|:::::|:||:||||.|.|...||.
  Rat   559 VYYHGCHLNGKSTHYHCMQVGCNKVYTSTSDVMTHENFHKKNTQLINDGFQRFRATEDCGTADCQ 623

  Fly   490 FFGKKISHYHCCREGCTHTFKNKADMDKHKTYHLKDHQLKMDGFKKILKTEVCPFDACKFSTVCN 554
            |:|:|.:|:||.|.|||.|||||.|::|||:||:||.....|||||..|.|.|.::.|.:|...|
  Rat   624 FYGQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKDDAYAKDGFKKFYKYEECKYEGCVYSKATN 688

  Fly   555 HIHCVREGCDYILHSSSQMISHKRKHDRQD-------GEQAYQQFKIKQDVEESSLDAMPQQQQQ 612
            |.||:|.||.:...|:|||.||||||:|:.       |..|........:.||||.|.:...   
  Rat   689 HFHCIRAGCGFTFTSTSQMTSHKRKHERRHIRSSGALGLPASLLGTKDTEHEESSNDDLVDF--- 750

  Fly   613 QQQQQPTSLSQSQSSSSVCGGSNTSTPLSSLSAEHFLARKRGRPPKKIQLPADAQQSEAKRLKVE 677
                  ::||...||.|....|..|:  :||:|                 .|.|..:||.....:
  Rat   751 ------SALSSKNSSLSASPNSQQSS--ASLAA-----------------AAAATTAEAVPSAAK 790

  Fly   678 DESSNPAMLLPQSQPAAAVHPLTSGLFPGLLPAAAAPGVDPTAPNFQLTHLMALFQLQNPLFYQN 742
            ..:|..|.||||.         .||..| |..|.:..|:..|.|.|.                  
  Rat   791 PPNSKMAGLLPQG---------LSGSIP-LALALSNSGLPTTTPYFP------------------ 827

  Fly   743 LYPGMTQNSSMLGNLAALSAASAAAAAAAA-------ANGAGVQQPKAEFS 786
            |.||....|..:|:...|.:.::.|..:|.       |:|||...|.|..|
  Rat   828 LLPGRGSASLPVGSPGLLGSMTSGATTSATPDMPALMASGAGDSAPTAATS 878



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336630
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4377
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006505
OrthoInspector 1 1.000 - - oto96365
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12451
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.890

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