DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and CAPN1

DIOPT Version :10

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_005177.2 Gene:CAPN1 / 823 HGNCID:1476 Length:714 Species:Homo sapiens


Alignment Length:401 Identity:128/401 - (31%)
Similarity:185/401 - (46%) Gaps:74/401 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   974 LTPADIRQESKLMENLRQLEETEALTKWQNIIQY-----------CRDNSELFVDDSFPPAPKSL 1027
            :||......|..::..|..|  ..|.:.:|.|:|           |..:..||.|::|||.|:||
Human     6 ITPVYCTGVSAQVQKQRARE--LGLGRHENAIKYLGQDYEQLRVRCLQSGTLFRDEAFPPVPQSL 68

  Fly  1028 YY---NPASGAGEGNPVVQWRRPHEINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLA 1089
            .|   .|.|....|   ::|:||.|:..:     |..:......:|||||.||:||||:|:|.|.
Human    69 GYKDLGPNSSKTYG---IKWKRPTELLSN-----PQFIVDGATRTDICQGALGDCWLLAAIASLT 125

  Fly  1090 EREDLVKEVLVTKEICGQ-------GAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVY-SQAKRKQ 1146
            ..:.|:..|:..    ||       |.:..:|.:.|:|..|:||||||. |.|.||: ..|:..:
Human   126 LNDTLLHRVVPH----GQSFQNGYAGIFHFQLWQFGEWVDVVVDDLLPI-KDGKLVFVHSAEGNE 185

  Fly  1147 LWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLL 1211
            .|..|:|||.||::|.||||..|...||....||...|...|:.:    ||:       ::..:|
Human   186 FWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKA----PSD-------LYQIIL 239

  Fly  1212 SSRCVRFLMGASCGGGNMKVDEEEYQQKGLRPRHAYSVLDVKDI----QGHRLLKLRNPWGHYSW 1272
            .:.....|:|.|....:: :|.|....|.|...|||||...|.:    |...|:::|||||...|
Human   240 KALERGSLLGCSIDISSV-LDMEAITFKKLVKGHAYSVTGAKQVNYRGQVVSLIRMRNPWGEVEW 303

  Fly  1273 RGDWSDDSSLWT-------DDLRDALMPHGASEGVFWISFEDVLNYFDCIDICKVRSG------- 1323
            .|.|||.||.|.       |.||..:     .:|.||:||.|.:..|..::||.:...       
Human   304 TGAWSDSSSEWNNVDPYERDQLRVKM-----EDGEFWMSFRDFMREFTRLEICNLTPDALKSRTI 363

  Fly  1324 --WNEVRLQGT 1332
              ||....:||
Human   364 RKWNTTLYEGT 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:395516
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:395516
zf-RanBP 643..672 CDD:395516
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:395516
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:395516
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:395516
CysPc 1001..1328 CDD:128526 120/368 (33%)
CAPN1NP_005177.2 Peptidase_C2 56..352 CDD:459889 112/325 (34%)
Domain III 355..526 4/20 (20%)
Calpain_III 364..524 CDD:238132 4/11 (36%)
Linker 527..542
Domain IV 543..713
EFh_PEF_CAPN1 546..714 CDD:320073
EF-hand motif 546..574 CDD:320073
EF-hand motif 589..618 CDD:320073
EF-hand motif 619..649 CDD:320073
EF-hand motif 655..683 CDD:320073
EF-hand motif 685..714 CDD:320073
Blue background indicates that the domain is not in the aligned region.

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