DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and zgc:136872

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001035341.1 Gene:zgc:136872 / 678524 ZFINID:ZDB-GENE-060421-5204 Length:693 Species:Danio rerio


Alignment Length:534 Identity:140/534 - (26%)
Similarity:211/534 - (39%) Gaps:137/534 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1001 WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPV-------VQWRRPHEINCDGGAYP 1058
            :|.:.|:|......|.|:.|||..||:      |.|   |:       |.|:||:|:      .|
Zfish    34 FQQLKQFCLKERLRFRDNLFPPELKSI------GLG---PLKRDDLWKVVWKRPYEL------VP 83

  Fly  1059 -PWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVL---VTKEICGQGAYQVRLCKDGK 1119
             |..:.:.....|..||.|||||.|:::..|..::.::|:|:   .|..:...|.:..|..:.|.
Zfish    84 NPVYIAQGTSRFDFIQGRLGNCWFLASVGALTFQKRIMKQVIQDDQTFSVDYAGIFHFRFWRFGS 148

  Fly  1120 WTTVLVDDLLP-CDKRGHLVYSQAKR-KQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAP 1182
            |..|::||.|| .|.:  ||:.|:|. .:.|..|:|||.||:.|.|..:.:|...|.|...||.|
Zfish   149 WVDVVIDDKLPTIDNQ--LVFVQSKTPNEFWPALLEKAYAKVCGSYADMDAGNISEALMDFTGGP 211

  Fly  1183 CESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGLRPRHAY 1247
            ..:|.|..:|           |.:|..:..:.....|||....||...|.:......||...|||
Zfish   212 HMTIKLSQAS-----------DKLWDIMRRAGQSESLMGCGTPGGQAGVLQNTVLPNGLVEMHAY 265

  Fly  1248 SVLDVKDI--QGH--RLLKLRNPWGHYSWRGDWSDDSSLWT---------DDLRDALMPHGASEG 1299
            :|..|.::  :|.  :|:::.||||...|..||||.|.||.         :|:.|        .|
Zfish   266 TVTGVTEVVCKGRPVKLVRIFNPWGSGEWNRDWSDRSPLWELVRPEDQKYNDVLD--------NG 322

  Fly  1300 VFWISFEDVLNYFDCIDIC---------KVRSGW-NEVR----LQGTLQPLCSISC--------V 1342
            .||:|.||....|..:|||         ...|.| .||.    :.||....||...        .
Zfish   323 EFWMSMEDFCRNFSEMDICCSDVNVLAGSQSSSWKTEVHKGQWVMGTTAGGCSNDIDSFSKNPQY 387

  Fly  1343 LLTVLEPTEAEFTLFQEGQRNSEKSQRSQLDLCVVIF-----RTRSPAAP-----EIGRLVEHSK 1397
            .:|:.|..|             :...:|..:|.|.:.     |.|..|..     .|..:..|.|
Zfish   388 RVTLKETVE-------------DPRDKSSANLLVSLIQKSHKRNRHLATNFHIGFNIYEVPAHLK 439

  Fly  1398 -----------RQVR------GFVGCHKMLE-----RDIYLLVCLAFNHWHTGIEDPHQYPQCIL 1440
                       |.||      .|:...:::|     ...||:|...|        .|::....:|
Zfish   440 DQKEKFPASFFRNVRVVGKNESFLNAREVMEFFRFKAGDYLIVPSTF--------QPNEASSFLL 496

  Fly  1441 AIHSSKRLLVEQIS 1454
            .::|....::|..|
Zfish   497 TVYSKTETIIEDTS 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 109/362 (30%)
zgc:136872NP_001035341.1 Peptidase_C2 48..341 CDD:279042 101/328 (31%)
Calpain_III 356..504 CDD:279416 31/168 (18%)
EFh 600..659 CDD:298682
EF-hand_7 600..656 CDD:290234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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