DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and Capn12

DIOPT Version :10

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001104277.1 Gene:Capn12 / 60594 MGIID:1891369 Length:720 Species:Mus musculus


Alignment Length:468 Identity:139/468 - (29%)
Similarity:203/468 - (43%) Gaps:99/468 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   998 LTKWQN---IIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEINCDGGAYPP 1059
            |.|.||   |.:.|.|:..||.|..||..|.:|.|:......|....|:|:||||...:     |
Mouse    26 LFKGQNYEAIRRACLDSGILFRDPCFPAGPDALGYDKLGPDSEKAKGVEWKRPHEFCAE-----P 85

  Fly  1060 WAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ-------GAYQVRLCKD 1117
            ..:......:|:|||.|||||||:|.|.|.....|:..|:..    ||       |.:..:|.:.
Mouse    86 QFICEDMSRTDVCQGSLGNCWLLAAAASLTLYPRLLYRVVPP----GQGFQDGYAGVFHFQLWQF 146

  Fly  1118 GKWTTVLVDDLLPCDKRGHLVYSQA-KRKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGA 1181
            |:|..|:|||.||. :.|.|::.:: :|.:.|.||:|||.||:||.||.:..|...|.....||.
Mouse   147 GRWVDVVVDDKLPV-REGKLMFVRSEQRNEFWAPLLEKAYAKLHGSYEVMRGGHMNEAFVDFTGG 210

  Fly  1182 PCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASC--GGGNMKVDEEEYQQKGLRPR 1244
            ..|.:.|:.::   |.        ::|.|..:.....|:||:.  ..|.::.||      ||...
Mouse   211 VGEVLYLRQNT---PG--------VFAALRHALAKESLVGATALSDRGEIRTDE------GLVKG 258

  Fly  1245 HAYSVLDVKDIQ-GH---RLLKLRNPWGHYSWRGDWSDDSSLW---TDDLRDALMPHGASEGVFW 1302
            |||||.....:. |.   |||:||||||...|.|.|||....|   ..:.||||:.. ..:|.||
Mouse   259 HAYSVTGTHKMSLGFTKVRLLRLRNPWGRVEWSGPWSDSCPRWDMLPSEWRDALLVK-KEDGEFW 322

  Fly  1303 ISFEDVLNYFDCIDICKVR----------SGWNEVRLQG-------------TLQPLCSISCVLL 1344
            :..:|.|.:|:.:.||.:.          .||:....||             :.:...:.....|
Mouse   323 MELQDFLTHFNTVQICSLSPEVLGPSPAGGGWHIHIFQGRWVRGFNSGGSQPSAENFWTNPQFRL 387

  Fly  1345 TVLEPTEAEFTLFQE---------GQRNSEKSQRSQLDLCVVIFRTRSPAAPEIGRLVEHSKRQV 1400
            |:|||.|.|....:|         |.|...:..|  :..|.|:.           .|::.::|.:
Mouse   388 TLLEPDEEEDDDDEEGPWGGWGAAGARGPARGGR--VPKCTVLL-----------SLIQRNRRCL 439

  Fly  1401 RG------FVGCH 1407
            |.      .||.|
Mouse   440 RAKGLTYLTVGFH 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:395516
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:395516
zf-RanBP 643..672 CDD:395516
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:395516
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:395516
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:395516
CysPc 1001..1328 CDD:128526 116/356 (33%)
Capn12NP_001104277.1 Peptidase_C2 46..339 CDD:459889 107/320 (33%)
Domain III 342..541 23/124 (19%)
Calpain_III 352..531 CDD:238132 23/114 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..415 4/21 (19%)
Domain IV 542..720
EFh_PEF 568..720 CDD:355382
EF-hand motif 597..624 CDD:320054
EF-hand motif 625..654 CDD:320054
EF-hand motif 661..689 CDD:320054
EF-hand motif 691..719 CDD:320054
Blue background indicates that the domain is not in the aligned region.

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