DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn5a

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001073476.1 Gene:capn5a / 563346 ZFINID:ZDB-GENE-061103-214 Length:639 Species:Danio rerio


Alignment Length:540 Identity:143/540 - (26%)
Similarity:221/540 - (40%) Gaps:120/540 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   993 EETEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPV--VQWRRPHEINCDGG 1055
            :|..||.|      .|:.|..||.|..|....:||:.       :||.:  |.|:||.:: |:  
Zfish    11 QEFSALRK------QCQQNHTLFEDPVFRAEDQSLFL-------QGNRLGKVTWKRPKDL-CE-- 59

  Fly  1056 AYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVL---------VTKEICGQGAYQ 1111
              .|..........|:.||.|||||.::|.:.||.||.|.::|:         ..|.....|.:.
Zfish    60 --DPHLFVNGISAHDLNQGQLGNCWFVAACSSLASREALWQKVIPDWKDQEWDKNKPESYAGIFH 122

  Fly  1112 VRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAK-RKQLWVPLIEKAVAKIHGCYEALVSGRAIEGL 1175
            .|..:.|.|..|::||.|| ...|.|:|..:. ..:.|..|:|||.||:.||||||..|...:.|
Zfish   123 FRFWRFGDWVGVVIDDRLP-TANGKLIYCHSNDSNEFWSALVEKAYAKMCGCYEALDGGNTADAL 186

  Fly  1176 ATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKG 1240
            ...||...|.:.|.....   ::||..:..::.::|.......|:..|. ....:.|.|.....|
Zfish   187 VDFTGGVSEPMDLLEGKF---AQDEEARHQLFDRVLKVHNRGGLISCSI-RATTQADMEARLDCG 247

  Fly  1241 LRPRHAYSVLDVKDIQ-GHRLL-----------KLRNPWGHYSWRGDWSDDSSLW---TDDLRDA 1290
            |...|||:|.||:.:: |..||           ::|||||...|.|.|||.|..|   :...|:.
Zfish   248 LVKGHAYAVTDVRKVRLGSGLLAFFKSEKLSMIRMRNPWGQRGWNGAWSDSSEEWKRVSKGERER 312

  Fly  1291 LMPHGASEGVFWISFEDVLNYFDCIDICK--------VRSGWNEVRLQGTL----QPLCSIS--C 1341
            |......:|.||:.|:|...:|..:.:|:        :...|.|..::|..    .||.:.|  |
Zfish   313 LGVTVEDDGEFWMDFDDFCKHFTDLILCRLINTSYLSIHKTWEEEVMRGCWSRHDDPLRNRSGGC 377

  Fly  1342 V-----LLT----VLEPTEAE----FTLFQEGQRNSEKS---------QRSQLDLCVVIFRTRSP 1384
            :     .|.    |.:.|:||    ..|.|:.:|...|.         ||.:|:.   |:|..| 
Zfish   378 INHKTTFLQNPQYVFDVTKAEDEVLICLQQQDKRARAKGENMAIGFDIQRVELNR---IYRMHS- 438

  Fly  1385 AAPEIGRLVEHSKRQVRGFVGCHKMLERDIYLLVCLAFNHWHTG------------------IED 1431
            ....:|..:..:.|.|  |:  .|.|:...|::|...|:....|                  :::
Zfish   439 IQKSVGSSIYINSRSV--FL--RKDLKEGRYVIVPSTFDPGMPGDFLLRIFTDVPSDCKELTVDE 499

  Fly  1432 PHQ--------YPQCILAIH 1443
            |.|        ||:.:..:|
Zfish   500 PPQTCWTSCCGYPKLVTQVH 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 104/361 (29%)
capn5aNP_001073476.1 Peptidase_C2 27..341 CDD:279042 98/330 (30%)
Calpain_III 354..490 CDD:279416 32/143 (22%)
C2_Calpain 512..637 CDD:176011 2/8 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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