DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sol and si:ch211-202f3.4

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_009291546.1 Gene:si:ch211-202f3.4 / 560088 ZFINID:ZDB-GENE-131120-116 Length:523 Species:Danio rerio


Alignment Length:550 Identity:136/550 - (24%)
Similarity:214/550 - (38%) Gaps:134/550 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   993 EETEALT--------KWQNIIQYCRDNSELFVDDSFPPAPKSL-YYNPASGAGEGNPVVQWRRPH 1048
            :|.::||        .:|.:.|.|...|.|:.|:.|||...|: .::......:.:.:| |:||.
Zfish    14 DEVDSLTSPLYFLDQNYQELQQKCLTESTLYSDELFPPDNSSIGLFDEVPPEVDMSQIV-WKRPS 77

  Fly  1049 EINCDGGAYPPWAVFRTPLPSDICQG-VLGNCWLLSALAVLAEREDLVKEVL-----VTKEICGQ 1107
            |:..|     |..:.......|..|| ||||||.|:::..|...:|::|:||     .||:..  
Zfish    78 ELVSD-----PNLIVDDVSRFDYAQGSVLGNCWFLASIGALTFEKDIMKQVLPAEQSFTKDYA-- 135

  Fly  1108 GAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAKRKQLWVPLIEKAVAKIHGCYEALVSGRAI 1172
            |.:..|..:..||..|::||.||......|........:.|..|:|||.||:.|.|..|.:|...
Zfish   136 GIFHFRFWRFEKWIDVVIDDQLPTIDDELLFVCSKTSNEFWPALLEKAYAKVCGSYADLNAGFIS 200

  Fly  1173 EGLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQ 1237
            |.|...||.......|.::    |::       :|..:..:...:.|:|  ||..:....||...
Zfish   201 EALMDFTGGTHMYYTLSSA----PAD-------LWKIMECAFISKTLIG--CGSNSEGSPEENEL 252

  Fly  1238 QKGLRPRHAYSVLDVKDIQGH----RLLKLRNPWGHYSWRGDWSDDSSLWTDDLRDA--LMPHGA 1296
            ..|:...|||:|..|.::...    :|::|.||||...|:|||||:|.||.....:|  ......
Zfish   253 LHGIIADHAYTVTGVFEVISEENPVQLVRLLNPWGEEEWQGDWSDESPLWETVCEEARKCCREVL 317

  Fly  1297 SEGVFWISFEDVLNYFDCIDIC------------------------------------------- 1318
            ::|.||:|.||....|:.||||                                           
Zfish   318 NDGEFWMSMEDFTRLFESIDICCLCPDFLDGSSDCHWTSKRHFGRWNAEKFMYNTFIHHLTAGGD 382

  Fly  1319 --KVRSGWNEVRLQGTLQPLCSISCVLLTVLEPTEAEFTLFQEGQRNSEKSQ------------- 1368
              |..:.|...:.:.|:..| :..|.  :...|.....:|.|..::.:..||             
Zfish   383 IIKTETFWKNPQFRVTIDEL-NEDCA--SGQRPENILVSLMQNHEKRNRNSQENYDIGFYVFEIP 444

  Fly  1369 ---RSQLD-LCVVIFRTRSPAAPEIGRLVEHSK-----RQVRGFVGCHKMLERDIYLLV-CLAFN 1423
               |.|.: ..:..|..|.|.|        |:.     |:|..|.    .||...||:| |    
Zfish   445 LEMRHQNERFAMEFFADREPVA--------HTDDLVWLREVMKFF----RLEPGEYLIVPC---- 493

  Fly  1424 HWHTGIEDPHQYPQCILAIHSSKRLLVEQI 1453
                 .::|.:....:|::.|.....:|||
Zfish   494 -----TKNPGETASFVLSVFSKHETHLEQI 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 103/384 (27%)
si:ch211-202f3.4XP_009291546.1 Peptidase_C2 44..339 CDD:279042 94/315 (30%)
Calpain_III 354..513 CDD:279416 29/182 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.