DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sol and si:ch211-202f3.3

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_017207337.2 Gene:si:ch211-202f3.3 / 553353 ZFINID:ZDB-GENE-080917-19 Length:846 Species:Danio rerio


Alignment Length:680 Identity:174/680 - (25%)
Similarity:261/680 - (38%) Gaps:198/680 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   908 SVVSASGAGSGAGAV----GASTSTKKW---QCPACTYDNCAASVVCDICSSPRGLASAVLGEAL 965
            |.::..|.||...|:    ..||:.|.:   :..|.|.:...:.|..  |.:  ||..|.|...:
Zfish    56 SSMNDGGTGSMQSALSDLSSISTAPKTFGISELDASTINTLTSGVFW--CGA--GLLPAFLKPEV 116

  Fly   966 GRKSVRVA---------------LTPADIRQES---------KLMENLRQLE-----ETEALTKW 1001
            |:||.:.:               |...|.:...         |:| |.|.::     :|..| |:
Zfish   117 GQKSAKASHRQRRRRLLWVKFLNLAFKDFKMPPPVVPHGMCLKVM-NDRNMKGGMGSDTNPL-KF 179

  Fly  1002 Q----NIIQ-YCRDNSELFVDDSFPPAPKSLYYNPASGAGEG--NPV----VQWRRPHEINCDGG 1055
            .    |.:| ||....:.|||:.|||..:|:        |||  .|.    |:|.||.::     
Zfish   180 MDQDYNFLQDYCLKTRQRFVDEFFPPDLRSI--------GEGLLKPEVMARVEWIRPTKL----- 231

  Fly  1056 AYPPWAVFRTPLPS--DICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ-------GAYQ 1111
             ||..|.|.....|  |..||.:||||.|:::..|..:..|:::|:..    ||       |.:.
Zfish   232 -YPEAAEFVVDTVSRFDYAQGFIGNCWFLASVGALTFQSKLLQKVVPD----GQSLRHNYTGLFH 291

  Fly  1112 VRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAKR-KQLWVPLIEKAVAKIHGCYEALVSGRAIEGL 1175
            .|..:.|||..|::||.||...| .|::.::|. .:.|..|:|||.||:.|.|..:.:||..|.|
Zfish   292 FRFWRFGKWFDVVIDDKLPTINR-QLIFVKSKTYNEFWPALLEKAYAKVCGSYADMHTGRVSEAL 355

  Fly  1176 ATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKG 1240
            ...||.......|:.:    |::       :|..:..:.....|||.....||     ||....|
Zfish   356 LDFTGGVHMHYDLKTA----PTD-------LWEIMYRASQSEVLMGCESPAGN-----EERLPNG 404

  Fly  1241 LRPRHAYSVLDVKDIQGHR----LLKLRNPWGHYSWRGDWSDDSSLWT---DDLRDALMPHGASE 1298
            :...|||:|..|..:...|    |::|.||||...|.|||||:|.||.   |:.|..|:.  :..
Zfish   405 IVLGHAYTVTKVYQVMSGRNPVQLVRLFNPWGDSEWNGDWSDNSPLWNTVDDEDRKQLLV--SDN 467

  Fly  1299 GVFWISFEDVLNYFDCIDIC---------KVRSGWNEVRLQGTLQP-------------LCS--- 1338
            |.||:|.:|.|..||.:|||         |....|......|:..|             .|:   
Zfish   468 GEFWMSMKDFLRTFDNMDICCNCPDFLEGKSACKWTSKSHNGSWVPGSTAGGCMNHPDTFCTNPQ 532

  Fly  1339 ---------ISC------VLLTVLEPTEAEFTLFQEGQRNSEKSQRSQLDLCVVI---------- 1378
                     .:|      ||:::::..:         :||...:|...:..||..          
Zfish   533 FWLRINEMDKTCDQGQNNVLVSLIQKPD---------KRNRRLAQHHGIGFCVFAVPPEMRSEGK 588

  Fly  1379 ----FRTRSPAAPEIGRLVEHSKRQVRGFVGCHKMLERDIYLLVCLAFNHWHTGIEDPHQYPQCI 1439
                |..|.|.... |..  ...|||..|.    .||...||:|...:.        |::....|
Zfish   589 FRSSFFNRKPVVTS-GNF--QDARQVMKFF----RLEPGEYLIVPSTYL--------PNKNADFI 638

  Fly  1440 LAI-------------HSSKRLLVEQISPS 1456
            |:|             .:.|..||:.|..|
Zfish   639 LSILCKNDIQIQKDTERTEKDFLVDLIGVS 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035 5/29 (17%)
RanBP2-type Zn finger 931..950 CDD:275376 3/21 (14%)
CysPc 1001..1328 CDD:128526 113/363 (31%)
si:ch211-202f3.3XP_017207337.2 Peptidase_C2 198..487 CDD:306994 105/325 (32%)
Calpain_III 509..647 CDD:307285 28/161 (17%)
EFh_PEF_CAPN13_14 683..846 CDD:320070
EF-hand motif 683..709 CDD:320070
EF-hand motif 723..752 CDD:320070
EF-hand motif 753..783 CDD:320070
EF-hand motif 789..817 CDD:320070
EF-hand motif 819..846 CDD:320070
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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