DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn11

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_031757539.1 Gene:capn11 / 541454 XenbaseID:XB-GENE-940593 Length:713 Species:Xenopus tropicalis


Alignment Length:598 Identity:163/598 - (27%)
Similarity:244/598 - (40%) Gaps:181/598 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   955 GLASAVLGEALGRKSVRVALTPADIRQESKLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDS 1019
            |:||.:..|.|  |:..|......:|.:::..|:|:               |.||::..||.|.:
 Frog     6 GIASKLKIERL--KASGVGSHDCAVRYQNQDYESLK---------------QQCRESGSLFEDPN 53

  Fly  1020 FPPAPKSLYY---NPASGAGEGNPVVQWRRPHEINCD-----GGAYPPWAVFRTPLPSDICQGVL 1076
            |||...||.:   .|.:...:|   |||:|||:|..|     |||      .||    |||||.|
 Frog    54 FPPIGSSLGFKELGPGTSKTKG---VQWKRPHDIADDPQFIVGGA------TRT----DICQGAL 105

  Fly  1077 GNCWLLSALAVLAEREDLVKEVLVTKEICGQ-------GAYQVRLCKDGKWTTVLVDDLLPCDKR 1134
            |:||||:|:..|...|||:..|:..    ||       |.:..::.:.|:|..|::||.||. |.
 Frog   106 GDCWLLAAIGSLTLNEDLLHRVVPH----GQGFQDDYAGIFHFQIWQFGEWVDVVIDDRLPV-KD 165

  Fly  1135 GHLVY-SQAKRKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQASSLPMPSE 1198
            |.||: ..|:..:.|..|:|||.||::|.||||..|...||....||...|...|:      .:.
 Frog   166 GELVFVHSAECSEFWSALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELR------KAP 224

  Fly  1199 DELDKDLIWAQLLSSRCVRFLMGASCGGGNMKV----DEEEYQQKGLRPRHAYSVLDVKDIQ--- 1256
            ..|||.:          .|.|...|..|.::.:    |.|....|.|...|||||..::::.   
 Frog   225 RNLDKII----------KRALDRGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTALREVNYMG 279

  Fly  1257 -GHRLLKLRNPWGHYSWRGDWSDDSSLWT-------DDLRDALMPHGASEGVFWISFEDVLNYFD 1313
             ..:|:::|||||...|.|.|||:||.|.       :||:..:     .:|.||:||::.|..|.
 Frog   280 GVEKLIRIRNPWGQVEWTGAWSDNSSEWNEVDPSEQEDLQLKM-----EDGEFWMSFQEFLRQFS 339

  Fly  1314 CIDICKV---------RSGWNEVRLQGT------------------LQPLCSISCVLLTVLE--- 1348
            .::||.:         :|.|:.....||                  :.|...:     |:||   
 Frog   340 RLEICNLTPDALDKDGQSKWHSTLYDGTWRRGSTAGGCRNNPATFWINPQFKV-----TLLEEDD 399

  Fly  1349 -PTEAEFT---LFQEGQRNSEKSQRSQLDLCVVIFRTRSPAAPEIGRLVEHSKRQVRGFVGCHKM 1409
             |.:.|..   |....|:|..|.::...|:            ..||..|.....:.||....|  
 Frog   400 DPDDNELACSFLVALMQKNRRKERKVGQDM------------HTIGFAVYEVPDEFRGCQNVH-- 450

  Fly  1410 LERDI-----------------------------YLLVCLAFNHWHTGIEDPHQYPQCILAI--- 1442
            |::|.                             |::|...|        :||:....:|.|   
 Frog   451 LKKDFFLRHQSCARSETFINLREVSTQIRLPPGEYIIVPSTF--------EPHKEADFVLRIFTE 507

  Fly  1443 -HSSKRLLVEQIS 1454
             ||..:.|.|::|
 Frog   508 KHSDIQELDEEVS 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 120/366 (33%)
capn11XP_031757539.1 Peptidase_C2 49..345 CDD:395523 113/334 (34%)
Calpain_III 358..515 CDD:238132 31/183 (17%)
EFh_PEF 537..696 CDD:355382
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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