DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sol and Capn15

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001334263.1 Gene:Capn15 / 50817 MGIID:1355075 Length:1196 Species:Mus musculus


Alignment Length:1272 Identity:482/1272 - (37%)
Similarity:619/1272 - (48%) Gaps:314/1272 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 LGTSTDGSGEASESESQVEEHSIYAKVWKGPRKATESKIMHDPGSSSRLSGAASAAAGTASAGAI 620
            :|:|  .|..|:|:||   :|....    ||..         ||        ..||||...:|..
Mouse     1 MGSS--ASSLAAETES---DHGFPG----GPPY---------PG--------PPAAAGWCRSGPG 39

  Fly   621 AAAVGAAAASRHDNKTQLGN-----GSRSKM--WICIKCSYAYNRLWLQTCEMCEAKAEQQ--QQ 676
            ....|:|..:|...:.:..:     ||.:.:  |.|.:|:: .|....:.|.:|||...:.  .|
Mouse    40 ETVWGSALVTRQHPRPRAQSHTHSPGSMATVGEWSCARCTF-LNPAGQRQCSICEAPRHKPDLDQ 103

  Fly   677 QLQLQQQQQQQQQHHHHHLQQQQAEAPRDEPWTCKKCTLVNYSTAMACVVCG------------- 728
            .|:|..::|:                     |.|.:||..|:....||.|||             
Mouse   104 ILRLSVEEQK---------------------WPCARCTFRNFLGKEACEVCGFTPEPVPGAPLLP 147

  Fly   729 -----------------GSKLKSISSI----------------------------------EDMT 742
                             ||..:....:                                  |...
Mouse   148 IINGVLPKPPTILVEPKGSGKEEAGPVRTAGLVATEPARGRPEGEEEREERGEEEEKEQEGEGER 212

  Fly   743 LRKGEFWTCSHCTLKNSLHSPVCSACKSHRQ-------PQLSMAMEAVRERPDGQSYEEQDAAAV 800
            ...|..|.|..|||.|:..:..||||...|:       |:..:..|.|  .|.|.......:..|
Mouse   213 AEPGSGWACQRCTLHNTPVASSCSACGGPRKLSLPRIPPEALVVPEVV--APTGFHVVPAPSQPV 275

  Fly   801 GGGGGSAHQSGANEVKAPTALNLPLTSVALPMPMLQLPTSTAAGLRGSRSPSPRMQLLPSLQQ-- 863
            ..|.|:       |..:|:....| ||.....|.:.|.:..:..|:.:..|..|.::.|.||.  
Mouse   276 LPGEGA-------EADSPSTSQGP-TSTDQEPPRVPLFSPFSPTLQNNPVPRSRREVPPQLQPPV 332

  Fly   864 ----QRNSSSSGAIPK----RHSTGGS----------------------IVPRN----------- 887
                |.::|:|...|:    |.:.|.|                      .||.:           
Mouse   333 PEAVQSSASTSSKGPQQGPGRAAAGASRLAELLSGKELLPGKRLSVLEEEVPESSPARCESCSDV 397

  Fly   888 ISIAG-------------------LANYNLQQGQGVGSASVVSAS------------------GA 915
            |.:||                   .|...|:........||...|                  ||
Mouse   398 IDLAGDIVRYTPASPSSPDFTTWSCARCTLRNPTTAPRCSVCGGSKLHGFQEHSEPPTHCPDCGA 462

  Fly   916 ---GSGAGAVGASTSTKK-----------WQCPACTYDNCAASVVCDICSSPRGLASAVLGEALG 966
               |...|:.|.:.|..|           |.|||||..|...:..|..|.:|:.|.:...|    
Mouse   463 NKPGPCVGSCGRAPSAHKAVRLLPDRPGQWACPACTLINTPRAKHCAACHTPQLLVTQCRG---- 523

  Fly   967 RKSVRVALTPADIRQESKLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNP 1031
                   .||.. |:||..:|..||.:|.||...|:||:.:||:||..||||||||.|.|:.: |
Mouse   524 -------ATPLR-RRESMHVEKRRQTDEGEAKALWENIVAFCRENSVNFVDDSFPPGPASVGF-P 579

  Fly  1032 ASGAGEGNPVVQWRRPHEINC----DGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAERE 1092
            . |......|.||.|||||||    |.|.  ||:||.|..||||.||:|||||.||||||||||.
Mouse   580 V-GDSVQQRVKQWLRPHEINCSVFRDHGT--PWSVFHTLRPSDILQGLLGNCWFLSALAVLAERP 641

  Fly  1093 DLVKEVLVTKEICGQGAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAKRKQLWVPLIEKAVA 1157
            |||:.|:||:.:|.:|||||||||||.||||||||:||||:.|.|::|||:||||||.|||||:|
Mouse   642 DLVERVMVTRSLCAEGAYQVRLCKDGTWTTVLVDDMLPCDEAGFLLFSQAQRKQLWVALIEKALA 706

  Fly  1158 KIHGCYEALVSGRAIEGLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGA 1222
            |:||.|.||.:|||||||||||||||||:.||.|| ..|.|:.:|.|||||::|||:...|||||
Mouse   707 KLHGSYFALQAGRAIEGLATLTGAPCESLALQVSS-TNPREEPVDTDLIWAKMLSSKEAGFLMGA 770

  Fly  1223 SCGGGNMKVDEEEYQQKGLRPRHAYSVLDVKDIQGHRLLKLRNPWGHYSWRGDWSDDSSLWTDDL 1287
            ||||||||||:..|:..|||||||||||||:|:||.|||:||||||.:||.|.|||:...|...|
Mouse   771 SCGGGNMKVDDAAYESLGLRPRHAYSVLDVRDVQGSRLLRLRNPWGRFSWNGSWSDEWPHWPGHL 835

  Fly  1288 RDALMPHGASEGVFWISFEDVLNYFDCIDICKVRSGWNEVRLQGTLQPLCS--ISCVLLTVLEPT 1350
            |..|||||:||||||:.:.|.:.|||.:|||||.|.|.|.|:||.......  :....|||||..
Mouse   836 RAELMPHGSSEGVFWMEYSDFIRYFDSVDICKVHSDWQEARVQGCFPSTAGGPVGVTALTVLERA 900

  Fly  1351 EAEFTLFQEGQRNSEKSQRSQLDLCVVIFRTR--SPAAPEIGRLVEHSKRQVRGFVGCHKMLERD 1413
            ..||.|||||.|.|:......||||:::||..  :.....:|||:.||||.|:.||.|..|||..
Mouse   901 SLEFALFQEGSRRSDSVDSHLLDLCILVFRATFGTGGRLSLGRLLAHSKRAVKKFVNCDVMLEPG 965

  Fly  1414 IYLLVCLAFNHWH---------------------------------------------------- 1426
            .|.:||.|||||:                                                    
Mouse   966 EYAVVCCAFNHWNPAPPGPPAQGKGPSQMRPTPSFPTSEPQSPPTGKLLAPLSTPPTASSPSAGV 1030

  Fly  1427 -TGIEDPHQYPQCILAIHSSKRLLVEQISPSPHLLADAIISLTLTKGQRHEGREGMTAYYLTKGW 1490
             .|..:|   |..:||::||:.::||.:...|..||||||.||.::|:|||||||||.||||.||
Mouse  1031 PRGAPEP---PGHVLAVYSSRLVMVEPVEAQPTTLADAIILLTESRGERHEGREGMTCYYLTHGW 1092

  Fly  1491 AGLVVMVENRHENKWIHVKCDCQESYNVVSTRGELKTVDSVPPLQRQVIIVLTQLEGSGGFSIAH 1555
            |||:|:|||||...::||:|||.:|:|||||||.|:|.||||||.|||:::|:||||:.||||.|
Mouse  1093 AGLIVVVENRHPKSYLHVQCDCTDSFNVVSTRGSLRTQDSVPPLHRQVLVILSQLEGNAGFSITH 1157

  Fly  1556 RLTHRLANSRGLHDWGPPGATHCPPI-ENVHGLHAPR 1591
            ||.||.|....|.||.....||.||: .:|.|||.||
Mouse  1158 RLAHRKAAQAFLSDWTASRGTHSPPLTPDVAGLHGPR 1194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035 8/30 (27%)
RanBP2-type Zn finger 647..667 CDD:275375 5/19 (26%)
zf-RanBP 704..731 CDD:279035 11/56 (20%)
RanBP2-type Zn finger 708..727 CDD:275376 7/18 (39%)
zf-RanBP 747..774 CDD:279035 11/33 (33%)
RanBP2-type Zn finger 749..768 CDD:275376 8/18 (44%)
zf-RanBP 927..954 CDD:279035 11/37 (30%)
RanBP2-type Zn finger 931..950 CDD:275376 8/18 (44%)
CysPc 1001..1328 CDD:128526 215/330 (65%)
Capn15NP_001334263.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834931
Domainoid 1 1.000 417 1.000 Domainoid score I651
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 792 1.000 Inparanoid score I509
Isobase 1 0.950 - 0 Normalized mean entropy S5116
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D111762at33208
OrthoFinder 1 1.000 - - FOG0005761
OrthoInspector 1 1.000 - - oto95304
orthoMCL 1 0.900 - - OOG6_104309
Panther 1 1.100 - - LDO PTHR10183
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3089
SonicParanoid 1 1.000 - - X4152
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.880

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