DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn5

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001006736.1 Gene:capn5 / 448405 XenbaseID:XB-GENE-947203 Length:642 Species:Xenopus tropicalis


Alignment Length:651 Identity:162/651 - (24%)
Similarity:254/651 - (39%) Gaps:160/651 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1000 KWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEINCDGGAYPPWAVFR 1064
            ::|.:.:.|:....||.|..||....:|:|......|     |||:||.|...|.      .:|.
 Frog    12 QYQALKKECQSKKVLFEDPVFPANNDALFYKTQRVQG-----VQWKRPKEFCTDP------HLFV 65

  Fly  1065 TPLPS-DICQGVLGNCWLLSALAVLAEREDLVKEVL---------VTKEICGQGAYQVRLCKDGK 1119
            ..:.| |:.||.:||||.::|.:.||.||.|.::|:         ..|.....|.:.....|.|:
 Frog    66 DGISSHDLHQGQVGNCWFIAACSSLASREQLWQKVIPDWKEQEWYADKPQIYAGIFHFHFWKFGE 130

  Fly  1120 WTTVLVDDLLPCDKRGHLVYSQAKRK-QLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPC 1183
            |..|::||.|| .....|:|..:..| :||..|:|||.||:.||||||..|...:.|...||...
 Frog   131 WVDVVIDDRLP-TINNQLIYCHSNEKNELWCALVEKAYAKLAGCYEALDGGNTADALVDFTGGVS 194

  Fly  1184 ESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGG-------GNMKVDEEEYQQKGL 1241
            |  |::.:.....::.|...||.         .|.|...:.||       .....|.|.....||
 Frog   195 E--PIELTEGHFVTDVEKRNDLF---------ERVLKVHNRGGLISCSIRATSASDMEARMACGL 248

  Fly  1242 RPRHAYSVLDVKDIQ-GHRLL-----------KLRNPWGHYSWRGDWSDDSSLW---TDDLRDAL 1291
            ...|||:|.||:.:: ||.||           ::|||||...|.|.|||.|..|   :...|:.|
 Frog   249 VKGHAYAVTDVRKVRLGHGLLAFFKSEKLEMIRMRNPWGEREWNGPWSDSSEEWQKVSKSEREKL 313

  Fly  1292 MPHGASEGVFWISFEDVLNYFDCIDICK-----------------VRSGWNEVRLQGTLQPLCSI 1339
            ......:|.||::|||...|:..|.:|:                 :||.|  |:.|..||.. |.
 Frog   314 GVTVEDDGEFWMTFEDFCKYYTDIIMCRLINTSYLSIHKTWEEAVLRSSW--VQHQDPLQNR-SG 375

  Fly  1340 SCV------------LLTVLEPTEAEFTLFQEGQRNSEKSQRSQLDLCVVI----------FRTR 1382
            .|:            :..|.:|.:......|:..:.:.:.:....:|.:..          ||..
 Frog   376 GCLNFKATYLQNPQFVFDVKKPEDEVLVCLQQKTKRTTRQEGKAENLAIGFEIHQVELNRRFRMH 440

  Fly  1383 SPAAPEIGRLVEHSKRQVRGFVGCHKMLERDI----YLLVCLAFNHWHTG--------------- 1428
            : ..|::...:..:.|.|        .|..|:    |:::...|:..|||               
 Frog   441 T-LQPKVASSIYINSRCV--------FLRTDLKEGRYVIIPTTFDPGHTGEFLLRVFTDLPSNCC 496

  Fly  1429 ---IEDPHQ--------YPQCILAIH-SSKRLLVEQIS---PSPHLLADAIISLTLTKGQRHEGR 1478
               :::|.:        |||.:..:| .|.:.|.:|.|   ..|::    |||....|.|....:
 Frog   497 ELKLDEPTKTCWSGLCGYPQLVSQVHVVSAQGLKQQDSNGGADPYV----IISCEGNKVQSPVIK 557

  Fly  1479 EGMT-------AYYLTKGWAGLVVMVENRHENKWIHVKCDCQESYNVVSTRGELKTVDSVPPLQR 1536
            :.:.       .:|..|....:||.|.|.:..|        .|...:|...|:...:.:...|:.
 Frog   558 DCLDPKFNVKGVFYRKKPGQPIVVQVWNHNVIK--------DEFMGLVVLSGDANNLQTQHSLEL 614

  Fly  1537 Q 1537
            |
 Frog   615 Q 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 113/376 (30%)
capn5NP_001006736.1 Peptidase_C2 27..341 CDD:395523 106/336 (32%)
Calpain_III 362..488 CDD:395848 23/137 (17%)
C2_Calpain 515..640 CDD:176011 25/113 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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