DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn2

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_031757476.1 Gene:capn2 / 448035 XenbaseID:XB-GENE-993758 Length:703 Species:Xenopus tropicalis


Alignment Length:567 Identity:156/567 - (27%)
Similarity:233/567 - (41%) Gaps:127/567 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   944 SVVCDICSSPRGLASAVLGEALGRKSVRVALTPADIRQESKLMENLRQLEETEALTKWQNIIQYC 1008
            |.|.|..:..|.|||     .||              ...|.:..|.|  :.|||.      ..|
 Frog     2 SGVADRLAKERALAS-----GLG--------------TNEKALPYLSQ--DYEALR------NEC 39

  Fly  1009 RDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEINCD-----GGAYPPWAVFRTPLP 1068
            ..:..||.|.|||....||.:............|.|:||.::..|     |||      .||   
 Frog    40 LQSGTLFKDLSFPAIHSSLGFKELGQHSAKCQGVVWKRPKDLCPDPQFIAGGA------TRT--- 95

  Fly  1069 SDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ----GAYQVRLCKDGKWTTVLVDDLL 1129
             |||||.||:||||:|:|.|...|.::..| |.|:...|    |.:..:..:.|:|..|::||.|
 Frog    96 -DICQGALGDCWLLAAIASLTLNEQILSRV-VPKDQSFQENYAGIFHFQFWQYGEWVDVVIDDRL 158

  Fly  1130 PCDKRGHLVY-SQAKRKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQASSL 1193
            | .|.|.|:: ..|:..:.|..|:|||.||::|.||||..|...||....||...|...|:.:  
 Frog   159 P-TKDGKLLFVHSAEGSEFWSALMEKAYAKLNGSYEALSGGTTTEGFEDFTGGLAEWYELRKA-- 220

  Fly  1194 PMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGLRPRHAYSVLDVKDIQ-- 1256
            |......:.|.|....||.  |...:..|:        :.|....:.|...|||||...:::|  
 Frog   221 PPNLFKIIQKALRTGSLLG--CSIDITSAA--------ETEAITFQKLVKGHAYSVTAAEEVQYR 275

  Fly  1257 GH--RLLKLRNPWGHYSWRGDWSDDSSLWTD---DLRDALMPHGASEGVFWISFEDVLNYFDCID 1316
            |:  :|:::|||||...|.|.|||:||.|..   |:|:.|:.. ..:|.||:||.|.|..:..::
 Frog   276 GNLEKLIRIRNPWGEVEWTGAWSDNSSEWNSVDPDVREKLIKR-CDDGEFWMSFNDFLRNYSRLE 339

  Fly  1317 ICKVR---------SGWNEVRLQGT------------------LQPLCSISCVLLTVLEPTEAEF 1354
            ||.:.         |.|:..::.||                  :.|...|.      ||..:.:.
 Frog   340 ICNLTPDTLASDKYSKWSLTKMDGTWRRGSTAGGCRNFPETFWMNPQYVIK------LEEADDDP 398

  Fly  1355 TLFQEG--------QRNSEKSQRSQLDLCVVIFRTRSPAAPEIGRLVEHSK--RQVRGFVGCHKM 1409
            ...:||        |:|..|.::...|:..:.|     |..|:...:...|  |..|.::..:|:
 Frog   399 DDNEEGCTFIVGLIQKNRRKQRKMGEDMHTIGF-----AIYEVPPQLTGQKDIRLSRDYILRNKI 458

  Fly  1410 LER-DIYLLVCLAFNHWH---------TGIEDPHQYPQCILAIHSSK 1446
            .|: |.|:.:....|.:.         ....:||:.....|.:.|.|
 Frog   459 REKSDTYINLREVLNRFRLPPGEYVILPSTFEPHKVGDFCLRVFSEK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035 3/9 (33%)
RanBP2-type Zn finger 931..950 CDD:275376 3/5 (60%)
CysPc 1001..1328 CDD:128526 113/352 (32%)
capn2XP_031757476.1 Peptidase_C2 46..342 CDD:395523 108/320 (34%)
Calpain_III 363..502 CDD:395848 26/149 (17%)
EFh_PEF 537..703 CDD:355382
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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