DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn3a

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_021322825.1 Gene:capn3a / 447832 ZFINID:ZDB-GENE-040912-97 Length:736 Species:Danio rerio


Alignment Length:558 Identity:153/558 - (27%)
Similarity:230/558 - (41%) Gaps:129/558 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   982 ESKLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRR 1046
            |..|.:.:|...:...|.| |..:|    ...||.|::||....||.|............:.|:|
Zfish    23 EGSLSKPIRFSGQDYTLLK-QEYLQ----KKTLFEDETFPATVDSLGYKELGHKSNKVKNIVWKR 82

  Fly  1047 PHEINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ---G 1108
            |.|| ||...:......||    |||||.||:||||:|:|.|...:.|:..|:..::...:   |
Zfish    83 PKEI-CDNPQFIVGGASRT----DICQGDLGDCWLLAAIACLTLNDKLLYRVIPQEQSFSEQYAG 142

  Fly  1109 AYQVRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAKRKQLWVPLIEKAVAKIHGCYEALVSGRAIE 1173
            .:..:..:.|.|..|:|||.:|......:....|:|.:.|..|:|||.||:||.||||..|...|
Zfish   143 IFHFQFWRYGDWVDVVVDDRIPTFNNQLVFTKSAERNEFWSALLEKAYAKLHGSYEALKGGNTAE 207

  Fly  1174 GLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVR-FLMGASCGGGNMKVDE---- 1233
            |:...||...|...::          |..|:|.  :::.....| .|||.|       :|.    
Zfish   208 GMEDFTGGVTEFYEMK----------EAPKELY--KIMQKALERGSLMGCS-------IDSLVPA 253

  Fly  1234 --EEYQQKGLRPRHAYSVLDVKDIQGH-------RLLKLRNPWGHYSWRGDWSDDSSLWTDDL-- 1287
              |.....||...|||||..|::.:..       ||::||||||...|.|.|||:|..| :.|  
Zfish   254 RFETRTATGLVKGHAYSVTAVEECKQSQQKESRVRLVRLRNPWGQVEWNGPWSDNSKEW-ESLSK 317

  Fly  1288 --RDALMPHGASEGVFWISFEDVLNYFDCIDICKVRSG---------W----NEVR-LQGTLQPL 1336
              ::.|....|.:|.||:||||....:..|:||.:...         |    ||.| ::|     
Zfish   318 AEKEKLQQQNAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDDKLHKWTVSVNEGRWVRG----- 377

  Fly  1337 CSI-SC------------VLLTVLE----PTEAE------FTLFQEGQRNSEKSQRSQLDLCVVI 1378
            ||. .|            ..|.:||    |.:.|      ..|.|:.:|...|...:.|.:...|
Zfish   378 CSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDDEVACTFVVALMQKNRRKERKLGANLLTIGFSI 442

  Fly  1379 FRTRSPAAPEIGRLVEH----------SKRQVRGFVGCHKMLER-----DIYLLVCLAFNHWHTG 1428
            :.    ...|:....:|          :|.:.|.::...::.:|     ..|:::..::      
Zfish   443 YE----VPKEMHGNKQHMQKEFFMSTTAKARSRAYINLREVTQRFRLSPGEYVIIPSSY------ 497

  Fly  1429 IEDPHQYPQCILAIHSSKRLLVEQIS---------PSP 1457
              :|||..:.||.:.|.||...|:|.         |||
Zfish   498 --EPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPSP 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 113/360 (31%)
capn3aXP_021322825.1 Peptidase_C2 51..351 CDD:306994 106/324 (33%)
Calpain_III 372..515 CDD:307285 29/159 (18%)
EFh_PEF 545..736 CDD:330173
EF-hand motif 545..585 CDD:320054
EF-hand motif 600..632 CDD:320054
EF-hand motif 633..670 CDD:320054
EF-hand motif 677..705 CDD:320054
EF-hand motif 707..735 CDD:320054
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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