DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn9

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001003501.1 Gene:capn9 / 445107 ZFINID:ZDB-GENE-010724-2 Length:688 Species:Danio rerio


Alignment Length:549 Identity:140/549 - (25%)
Similarity:222/549 - (40%) Gaps:138/549 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   992 LEETEALTK-WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPV-VQWRRPHEINCDG 1054
            :|.|:|..| ::.:.:.|....:||.|..||....||:|:      :..|| .:|:||.|| |..
Zfish    17 VESTQADGKTYEQLRRECLQKGKLFEDPDFPAVDGSLFYS------QRVPVNFEWKRPGEI-CKE 74

  Fly  1055 GAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ---GAYQVRLCK 1116
            ..:......||    |||||.||:||||:|:|.|..:|:.:..|:...:...:   |.:..:..:
Zfish    75 PQFITGGATRT----DICQGQLGDCWLLAAIASLTLKEETLNRVVPNDQTFDRGYAGIFHFQFWQ 135

  Fly  1117 DGKWTTVLVDDLLPCDKRGHLVY-SQAKRKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTG 1180
            ..||..|:|||.||| .|..||: ..|...:.|..|:|||.||::|.||||..|..:|.:...||
Zfish   136 HNKWMDVVVDDRLPC-VRDKLVFLHSADNNEFWSALLEKAYAKLNGSYEALKGGSTMEAMEDFTG 199

  Fly  1181 APCESIPLQ--ASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGLRP 1243
            ...|....:  .|:|.:..:..:::.             .::|.|. ......:.|.....||..
Zfish   200 GVGEMYETKNGPSNLFLILKKAIERG-------------SMLGCSI-DITSSAESEAQTSTGLVK 250

  Fly  1244 RHAYSVLDVKDIQGH----RLLKLRNPWGHYSWRGDWSDDSSLWT---DDLRDALMPHGASEGVF 1301
            .|||||..|:::...    :|:::|||||...|.|.|||:|..||   ...:..|:.:...:|.|
Zfish   251 GHAYSVTGVEEVNYRGAKVQLIRVRNPWGQVEWNGPWSDNSREWTVIDSSEKKRLLQNSLDDGEF 315

  Fly  1302 WISFEDVLNYFDCIDICK---------VRSGWNEVRLQGTL------------------------ 1333
            |:.|.|..:.:|.::||.         |...|.....:|:.                        
Zfish   316 WMEFGDFKSNYDKVEICNLSPDALSDDVSKQWAVNLFEGSWIRGSTAGGCRNYIDTFWTNPQFKL 380

  Fly  1334 --------QPLCSISCVLLTVLEPTEAEFTLFQEGQRNSEKSQRSQLDLCVVIFRTRSPAAPEIG 1390
                    ..|||:...|:                |:|..:.::..|||..:.|....  ||:. 
Zfish   381 HLENPDDGDKLCSVIVALM----------------QKNRRRLRKEGLDLETIGFAIYE--APDD- 426

  Fly  1391 RLVEH----------SKRQVRGFVGCHKMLER-----DIYLLVCLAFNHWHTGIEDPHQYPQCIL 1440
              .:|          ||.:.|.::...::.||     ..||||...|        .||:....::
Zfish   427 --QDHQGKDFFRYNPSKARSRTYINVREVSERFRLPPGNYLLVPTTF--------QPHKEADFLI 481

  Fly  1441 AIHSSKRL------------LVEQISPSP 1457
            .:.|.|:.            |.|...|:|
Zfish   482 RLFSEKKAGAIEVGNKIEADLPEPPKPNP 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 104/349 (30%)
capn9NP_001003501.1 Peptidase_C2 41..333 CDD:279042 99/317 (31%)
Calpain_III 347..489 CDD:279416 29/170 (17%)
EFh 564..618 CDD:298682
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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