DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn2l

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001003485.1 Gene:capn2l / 445091 ZFINID:ZDB-GENE-050417-341 Length:700 Species:Danio rerio


Alignment Length:632 Identity:159/632 - (25%)
Similarity:257/632 - (40%) Gaps:159/632 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   977 ADIRQESKLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYY---NPASGAGEG 1038
            |.|...::.::.|.|  :.|||.:      .|.::..||.||.|.....:|.:   .|.|....|
Zfish    16 AGIGTNAQAVKFLNQ--DYEALKR------ECLESGRLFHDDMFEANVSALGFKELGPNSSKVRG 72

  Fly  1039 NPVVQWRRPHEINCD-----GGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEV 1098
               |:|.||.::..:     |||      .||    |||||.||:||||:|:|.|...:|:...|
Zfish    73 ---VEWLRPKQLTSNPTFISGGA------TRT----DICQGALGDCWLLAAIASLTLNQDVFARV 124

  Fly  1099 LVTKEICGQ-------GAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVY-SQAKRKQLWVPLIEKA 1155
            :.    .||       |.:..:..:.|:|..|::||.||. :.|.|:: ..|:..:.|..|:|||
Zfish   125 VP----AGQSFDGDYAGIFHFQFWQFGEWVDVVIDDRLPA-RNGELLFVHSAEGSEFWSALLEKA 184

  Fly  1156 VAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQASSLPMPS-EDELDKDLIWAQLLSSRCVRFL 1219
            .||::||||||..|...||....||...|...|..:.   |: ...:.|.|.|..||.  |...:
Zfish   185 YAKLNGCYEALSGGTTTEGFEDFTGGIAEVHELAKAG---PNLFKTIQKALSWGSLLG--CSIDI 244

  Fly  1220 MGASCGGGNMKVDEEEYQQKGLRPRHAYSVLDVKDIQGH----RLLKLRNPWGHYSWRGDWSDDS 1280
            ..:|        |.|....:.|...|||||...::::..    :|:::|||||...|.|.|||.|
Zfish   245 TSSS--------DSEAITSQKLVKGHAYSVTGAEEVEYRGDLTKLIRIRNPWGQVEWTGPWSDGS 301

  Fly  1281 SLW---TDDLRDALMPHGASEGVFWISFEDVLNYFDCIDIC------------------KVRSGW 1324
            |.|   :|:.|:.|... |.:|.||:||.|.:.::..::||                  |....|
Zfish   302 SEWRQISDNDRERLSSK-AEDGEFWMSFSDFMRHYSRVEICNLTPDALTDESVNKWALSKFDGNW 365

  Fly  1325 NEVRLQGTLQPLCS-------ISCVLLTVLE-----PTEAEF-TLFQEG--QRNSEKSQRSQLDL 1374
            .    .|:....|.       ::...|..||     ||:.|. ..|..|  |:|..|.::...|:
Zfish   366 R----NGSTAGGCRNYPNSFWMNPQFLIKLEEQDDDPTDNEAGCSFVVGLIQKNRRKMRKVGEDM 426

  Fly  1375 CVVIFRTRSPAAPEIGR---------LVEH-SKRQVRGFVGCHKMLER-----DIYLLVCLAFNH 1424
            ..:.|.........:|:         .|.| |..:...|:...::..|     ..||:|...|  
Zfish   427 NTIGFAIYEVPDQFVGQRNVHLDRNFFVRHASAARSETFINLREVCSRFCLPPGEYLIVPSTF-- 489

  Fly  1425 WHTGIEDPHQYPQCILAIHSSKRLLVEQISPSPHLLADAIISLTLTKGQRHEGREGMTAYYLTKG 1489
                  :|::.....:.:.|.|:...:::...   :...:..:.:|:|.                
Zfish   490 ------EPNKDGDFCVRVFSEKQAEFQELDDP---VESKVAEIEITEGD---------------- 529

  Fly  1490 WAGLVVMVENRHENKWIHVK-CDCQES--------YNVVSTRGELKT 1527
                   :::|.:..:..:. .||:.|        .||::.|.|:||
Zfish   530 -------IDSRFKKLFGQLAGADCEISAFELQKILNNVIAKRKEIKT 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 112/368 (30%)
capn2lNP_001003485.1 Peptidase_C2 46..342 CDD:279042 107/327 (33%)
Calpain_III 356..507 CDD:279416 30/162 (19%)
EFh 577..631 CDD:298682
FRQ1 604..>695 CDD:227455
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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