DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn8

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001231009.1 Gene:capn8 / 337730 ZFINID:ZDB-GENE-050522-279 Length:701 Species:Danio rerio


Alignment Length:555 Identity:149/555 - (26%)
Similarity:226/555 - (40%) Gaps:120/555 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   962 GEALGRKSVRVALTPADIRQESKLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDSFPPAPKS 1026
            ||.||.....:.....|                      :|::.|.|.....||.|.:||....|
Zfish    15 GEGLGTNEKAIPYNKQD----------------------YQSLKQECLAKRALFCDPTFPAESDS 57

  Fly  1027 LYYNPASGAGEGNPVVQWRRPHEINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAER 1091
            |.||...........|||:||.|: |....:......||    |||||.||:||||:|:|.|.  
Zfish    58 LGYNELGRYSFKTKGVQWKRPKEL-CSNPEFIMDGANRT----DICQGALGDCWLLAAIASLT-- 115

  Fly  1092 EDLVKEVLVTKEICGQ-------GAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVY-SQAKRKQLW 1148
              |.||:|......||       |.:..:..:.|:|..|::||.|| .:.|.|:: ..|:..:.|
Zfish   116 --LDKEILERVVPSGQSFTEDYAGIFHFQFWQYGEWVDVVIDDRLP-TRDGKLLFVHSAEGSEFW 177

  Fly  1149 VPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSS 1213
            ..|:|||.||::|.||||..|...||....||...|:..|  |..|    ..|.|.:..|..|.|
Zfish   178 SALLEKAYAKVNGSYEALTGGSTTEGFEDFTGGITENYEL--SKAP----PNLFKLVQKALALGS 236

  Fly  1214 RCVRFLMGASCGGGNMKVDEEEYQQKGLRPRHAYSVLDVKDIQGH----RLLKLRNPWGHYSWRG 1274
                 |:|.|....| ..:.|......|...|||||...:::...    :|:::|||||...|.|
Zfish   237 -----LLGCSIDITN-SYETEAVTSLKLVKGHAYSVTAAEEVHFRGSLVQLVRIRNPWGEVEWTG 295

  Fly  1275 DWSDDSSLWTDDLR---DALMPHGASEGVFWISFEDVLNYFDCIDICKVR---------SGWNEV 1327
            .|||:|..| |.:|   .|.:.:.|.:|.||:::.|.:..|..::||.:.         :.|:..
Zfish   296 AWSDNSKEW-DSVRPEEKAKLDYSAEDGEFWMAYSDFIQQFSKLEICNLTPDTLSSEEVNRWSYS 359

  Fly  1328 RLQGTLQ-------------PLCSISCVLLTVLEPTE-----AEFTLFQEG--QRNSEKSQRSQL 1372
            :.:|..:             ..||....::.:.|..:     .....|..|  |::..|.:|...
Zfish   360 QFEGNWRVGSTAGGCRNNPATFCSNPQFMIKLEEIDDDPHDGVNGCTFLVGLIQKDGRKDKRFGR 424

  Fly  1373 DLCVVIF-----------RTRSPAAPEIGRLVEHSKRQVRG---FVGCHKMLER-----DIYLLV 1418
            ||..:.|           |:.....|::  |:.  :|.|.|   |:...::.||     ..|:::
Zfish   425 DLNTIGFAIYKVPDELKGRSNIHLGPDV--LLR--QRSVAGSNTFINLREVSERFKLPPGEYIII 485

  Fly  1419 CLAFNHWHTGIEDPHQYPQCILAIHSSKRLLVEQI 1453
            ...|        :||:....||.:.:.|.....||
Zfish   486 PSTF--------EPHRKGSFILRVFAEKEADASQI 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 114/350 (33%)
capn8NP_001231009.1 Peptidase_C2 46..342 CDD:279042 108/318 (34%)
Calpain_III 356..507 CDD:279416 29/162 (18%)
EFh 578..633 CDD:238008
EFh 607..691 CDD:298682
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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