DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and Alg-2

DIOPT Version :10

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_001104459.2 Gene:Alg-2 / 3355106 FlyBaseID:FBgn0086378 Length:178 Species:Drosophila melanogaster


Alignment Length:16 Identity:8/16 - (50%)
Similarity:11/16 - (68%) Gaps:1/16 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   998 LTKWQNIIQ-YCRDNS 1012
            :|.|||..: :.||||
  Fly    78 VTDWQNCFRSFDRDNS 93

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:395516
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:395516
zf-RanBP 643..672 CDD:395516
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:395516
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:395516
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:395516
CysPc 1001..1328 CDD:128526 7/13 (54%)
Alg-2NP_001104459.2 EFh_PEF_ALG-2 13..177 CDD:320058 8/16 (50%)
EF-hand motif 13..42 CDD:320058