DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sol and Capn11

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_011244781.1 Gene:Capn11 / 268958 MGIID:1352490 Length:753 Species:Mus musculus


Alignment Length:723 Identity:175/723 - (24%)
Similarity:284/723 - (39%) Gaps:201/723 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   938 YDNCAASVV----------C---------DICSSPRGLASAVLGEALGRKSVRVALTPADIRQES 983
            ||:....||          |         ||..:.:|:.:.:....|..|.|.......:.:.::
Mouse    16 YDSTKVQVVELMGLLALSACEEFLTGAWMDISWAEKGMVATINHSRLKDKGVGQHQNAYNYKNQN 80

  Fly   984 KLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPH 1048
              .|:||    .|.|.|           .|||.|..||..|:|:.........|....:.|:||.
Mouse    81 --YEDLR----AECLRK-----------GELFEDPFFPAEPRSIGVKNLGPNSEHMQNIYWQRPK 128

  Fly  1049 EINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ---GAY 1110
            :|     .:.|..:.....|:|||||:||:||||:|:..|.....|:..|:...:...:   |.:
Mouse   129 DI-----IHNPQFITNDFSPTDICQGILGDCWLLAAIGSLTTCPKLLYRVVPRNQSFKKNYAGIF 188

  Fly  1111 QVRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAKRKQ-LWVPLIEKAVAKIHGCYEALVSGRAIEG 1174
            ..:|.:.|.|..|:|||.|| .:...||:..|..:| .|..|:|||.||:.|.|.||..|..:||
Mouse   189 HFQLWQFGHWLNVVVDDRLP-TRNNKLVFVHASHRQDFWSALLEKAYAKLIGSYGALSGGSTLEG 252

  Fly  1175 LATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVR-FLMGASCG-GGNMKVDEEEYQ 1237
            |...||...:.||||     .|..:.|       :||.....: .|||.|.. ..|.:|:...:.
Mouse   253 LEDFTGGVAQCIPLQ-----KPPGNML-------RLLKKALEKSSLMGCSIEVTDNSEVETMTHN 305

  Fly  1238 QKGLRPRHAYSVLDVKDI----QGHRLLKLRNPWGHYSWRGDWSDDSSLWTD---DLRDALMPHG 1295
            .  |...|||:|..::|:    :...|::::||||...|.|.|||.::.|.:   |:|..|: |.
Mouse   306 M--LVRGHAYAVTGLEDVYYRDKLETLIRIQNPWGRVEWNGAWSDKATEWEEVSPDVRVQLL-HK 367

  Fly  1296 ASEGVFWISFEDVLNYFDCIDICKV----------RSGWNEVRLQGTLQ---------------- 1334
            ..:|.||:|:||.::.|..::||.:          :|.|:....:|:.:                
Mouse   368 KDDGDFWMSYEDFMSNFTLLEICNLTPDALNTWDYKSRWHSTFYEGSWRRGSTAGGCRNHPETFW 432

  Fly  1335 --PLCSISCVLLTVLEPTEAEFTLFQEGQRNSEKSQRSQLDLCVVIFRTRS-------PAAPEIG 1390
              |...||  |..|.:|.:           :|||::  .:..|:|....::       |....||
Mouse   433 SNPQFKIS--LPEVDDPED-----------DSEKNE--MVCTCLVALMQKNWRHAREGPQLLTIG 482

  Fly  1391 RLV------------EHSKRQV------RGF---------VGCHKMLERDIYLLVCLAFNHWHTG 1428
            .::            .|.|:..      .||         |..|..|....|:::...:      
Mouse   483 FVIFSVPKEFQNLRDIHLKKDFFLKYRDHGFSEIFINSREVNSHLRLPPGEYVIIPSTY------ 541

  Fly  1429 IEDPHQYPQCILAIHSSKR---LLVEQISPSPHLLADAII-------SLTLTKGQRHEGRE---- 1479
              :||:....:|.:.:.|.   .|::..:...||..:.:.       ||.|.|...:|..|    
Mouse   542 --EPHKDADFLLRVFTEKHSETWLLDDANRFEHLQEETVTDKDLDKDSLQLFKIMANEDGEVDMY 604

  Fly  1480 -------GMTA---YYLTKGWA-----GLVVMVE-------NRHE--------NKWIHV--KCDC 1512
                   .|||   .:.|||::     .::.:::       ..||        .||..:  :||.
Mouse   605 ALHKLLNRMTAKLRNFKTKGFSLEVCRRMINLLDKDGSGKLELHEFQVLWKKIKKWTEIFKECDE 669

  Fly  1513 QESYNVVS 1520
            ..|.|:.|
Mouse   670 DRSGNLNS 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035 7/34 (21%)
RanBP2-type Zn finger 931..950 CDD:275376 6/30 (20%)
CysPc 1001..1328 CDD:128526 107/349 (31%)
Capn11XP_011244781.1 Peptidase_C2 95..391 CDD:366222 102/316 (32%)
Calpain_III 413..559 CDD:366446 27/168 (16%)
EFh_PEF_CAPN11 586..753 CDD:320068 21/92 (23%)
EF-hand motif 586..614 CDD:320068 6/27 (22%)
EF-hand motif 629..658 CDD:320068 2/28 (7%)
EF-hand motif 659..688 CDD:320068 7/19 (37%)
EF-hand motif 695..722 CDD:320068
EF-hand motif 724..752 CDD:320068
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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