DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sol and Capn10

DIOPT Version :10

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_035926.2 Gene:Capn10 / 23830 MGIID:1344392 Length:666 Species:Mus musculus


Alignment Length:559 Identity:143/559 - (25%)
Similarity:231/559 - (41%) Gaps:125/559 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1013 ELFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEINCDGGAYP--PWAVFRTPLPSDICQGV 1075
            |||.|.:||.:..||:||.::...:....:.||||.||......:|  ||       ...:.||:
Mouse    12 ELFRDAAFPASDSSLFYNLSTPLAQFREDITWRRPQEICATPQLFPDNPW-------EGQVKQGL 69

  Fly  1076 LGNCWLLSALAVLAEREDLVKEVLVT-----KEICGQGAYQVRLCKDGKWTTVLVDDLLPCDKRG 1135
            ||:||.|.|.|.|.:.:.|:.:|...     .:...||.:..|:.:.|.|..|.:||.||| ..|
Mouse    70 LGDCWFLCACAALQKSQHLLDQVFPPGQPGWSDQKYQGFFTCRIWQFGHWEEVTIDDRLPC-LAG 133

  Fly  1136 HLVYSQAKRKQL-WVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQ-------ASS 1192
            .|.:|:.:|:.: |:||:|||.||:||.||.|.:|:..:.|..|||:..|...|:       ...
Mouse   134 RLCFSRCQREDVFWLPLLEKAYAKVHGSYEHLWAGQVADALVDLTGSLAERWSLKDVTKASGQQD 198

  Fly  1193 LPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGLRPRHAYSVLDVKDI-- 1255
            .|...|....:.|:.   |..||:     .||...:.:....|     |...||:.:.|::::  
Mouse   199 RPSGGEHRTCRQLLH---LKDRCL-----ISCSVLSPRAGARE-----LGEFHAFIISDLQELRS 250

  Fly  1256 ---QGHRLLKLRNPWGHYSWRGDWSDDSSLW--TDDLRDALMPHGASEGVFWISFEDVLNYFDCI 1315
               ||..||::.||||...|:|.|.:....|  .:..:::.:.....||.||:..|:.|..||.:
Mouse   251 QTGQGILLLRIHNPWGRRCWQGLWREGGEGWNQVEPAKESELLAQLQEGEFWVEEEEFLREFDEV 315

  Fly  1316 DI-------------------CKVRS---GWNEVRLQGTLQPLCSISC---VLLTVLEPTEAEFT 1355
            .|                   |..|:   .|...:..|..:......|   ..|.:|||:|....
Mouse   316 TIGYPVTEAGHLQSLHTERVLCHTRTLPGAWVTGQSAGGCRNNSCFPCNPKFWLRLLEPSEVCVA 380

  Fly  1356 LFQEGQRNSEKSQRSQLDLCVVIFRTR-----SPAAPEI-GR--------LVEHSKRQVR----- 1401
            :.|..:|.             ::.:||     |||...: |:        :.:..||::.     
Mouse   381 VLQRPRRR-------------LVGQTRALAGASPAPVNLPGKDYQAVGLHIWKVEKRKISLPRVL 432

  Fly  1402 -----GFVGCHKMLERDIYLLVCLAFNHW----HTGIED-PHQYPQCILAIH-------SSKRLL 1449
                 ....|| ..:|:|:|...|:..::    .|.::| |.|:   :|.:.       |:.||.
Mouse   433 SAPPVAGTACH-AYDREIHLRCELSPGYYLAVPSTFLKDVPGQF---LLRVFSTGKISLSAVRLA 493

  Fly  1450 VEQISPSPHLLADAIISLTL----TKGQRHEGREGMTAY 1484
            .:..||...|.|....::.|    ..||...|.....:|
Mouse   494 TKGASPGTALPAGEWETVQLQGCWRAGQTAGGSRNFASY 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:395516
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:395516
zf-RanBP 643..672 CDD:395516
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:395516
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:395516
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:395516
CysPc 1001..1328 CDD:128526 103/358 (29%)
Capn10NP_035926.2 CysPc 8..319 CDD:238004 100/327 (31%)
Domain III 1 322..488 31/182 (17%)
calpain_III 338..488 CDD:214786 30/166 (18%)
Calpain_III 506..647 CDD:238132 5/27 (19%)
Domain III 2 507..648 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.