DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and clp-7

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_500082.2 Gene:clp-7 / 176953 WormBaseID:WBGene00000547 Length:778 Species:Caenorhabditis elegans


Alignment Length:490 Identity:135/490 - (27%)
Similarity:201/490 - (41%) Gaps:102/490 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   861 LQQQRNSSSSGAIPKRHSTGG--SIVPRNISIAGLANYNLQQGQGVGSASVVSASGAGSGAGAVG 923
            :.|.....|||.:....|:||  |||...||.|      ..|..|:..|:       |:..||: 
 Worm   188 ISQGGGGDSSGGLTNVFSSGGMESIVGNLISSA------THQFFGINPAT-------GAIIGAI- 238

  Fly   924 ASTSTKKWQCPACTYDNCAASVVCDICSSPRGLAS---AVLGEALGRKSVR--VALTPA------ 977
                              |.:::..:......|:|   .||...:..|..|  ...||.      
 Worm   239 ------------------AGNIIFQMGGQNNSLSSIGKVVLDNIISGKFKRDVQPFTPGGGGGPG 285

  Fly   978 -DIRQESKLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPV 1041
             ..:|:.:.:             .:|...|.|.|...||.|..||....||||.    .....|:
 Worm   286 IGFQQQFQTI-------------NFQQERQRCLDQRCLFEDPQFPANDSSLYYK----TRPDEPI 333

  Fly  1042 VQWRRPHEINCDGGAYP-PWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEIC 1105
            : |:||.||      |. |..:.......|:.||.||:||||:|:|.|..|::|...|:...:..
 Worm   334 I-WKRPGEI------YENPQLIVGEKSRFDVKQGALGDCWLLAAVANLTLRDELFYRVVPPDQSF 391

  Fly  1106 GQ---GAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVYSQA-KRKQLWVPLIEKAVAKIHGCYEAL 1166
            .:   |.:..:..:.|:|..|::||.|| ...|.|.|.:: :..:.|..|:|||.||::|.||.|
 Worm   392 TENYAGIFHFQFWRYGQWVDVVIDDRLP-TVDGRLCYMRSQENNEFWSALLEKAYAKLYGGYENL 455

  Fly  1167 VSGRAIEGLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKV 1231
            ..|...|.|...||...|...:...          ||....|.|     ||.:...|..|.::..
 Worm   456 DGGTTAEALEDFTGGLTEFFDISKG----------DKSTTLAML-----VRGMQMGSLFGCSIDA 505

  Fly  1232 DE---EEYQQKGLRPRHAYSVLDVKDIQGH----RLLKLRNPWGH-YSWRGDWSDDSSLWTD--- 1285
            ||   |.....||...||||:..::.:..:    .||::|||||: ..|.|.|||.||.|:.   
 Worm   506 DENVKEAQLTNGLVRGHAYSITAIQTVNTYGGQVPLLRIRNPWGNSKEWNGAWSDGSSEWSQVDP 570

  Fly  1286 DLRDALMPHGASEGVFWISFEDVLNYFDCIDICKV 1320
            ..|:.:....|.:|.||:||:|.:..|..::.|.:
 Worm   571 QQREQMGVQFAKDGEFWMSFDDFMTNFTQMECCNL 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035 1/26 (4%)
RanBP2-type Zn finger 931..950 CDD:275376 1/18 (6%)
CysPc 1001..1328 CDD:128526 106/336 (32%)
clp-7NP_500082.2 Peptidase_C2 311..604 CDD:366222 100/319 (31%)
Calpain_III 627..777 CDD:238132
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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