DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and clp-1

DIOPT Version :10

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_498741.3 Gene:clp-1 / 176122 WormBaseID:WBGene00000542 Length:780 Species:Caenorhabditis elegans


Alignment Length:785 Identity:169/785 - (21%)
Similarity:278/785 - (35%) Gaps:244/785 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   793 EEQDAAAVGG--GGGSAHQSGA-------NEVKAPTALNLPLTSVALPMPMLQLPTSTAAGLRGS 848
            :|||....||  |||..:|.|.       |::..                   |..|...|..|.
 Worm   116 KEQDNYGGGGNYGGGGGNQGGGGGGGFNFNDIGG-------------------LINSMGGGGGGG 161

  Fly   849 RSPSPRMQLLPSLQQQRNSSSSGAI----------------PKRHSTGGSIVPRNISIAGLANYN 897
                           ||.....|..                .:.:..||::.|.|:: .|:.|. 
 Worm   162 ---------------QRQGGGGGGFGDILGGIGSLIGGGGGGQYNGGGGNVNPNNLN-GGMVNV- 209

  Fly   898 LQQGQGVGSAS---VVSASGAGSGAGAVGASTSTKKWQCPACTYDNCAASVVCDICSSPRGLAS- 958
              .|..:|.|:   :....|.|...|||                   |.:|:..:......|.: 
 Worm   210 --IGNLIGEAAHRFLGVDPGTGRIIGAV-------------------AGNVIMGLGGKDNSLGNI 253

  Fly   959 --AVLGEALGRK---------------------------SVRVALTPADIRQESKLMENLRQLEE 994
              .:|...:..|                           |.|....|.|..:       ||    
 Worm   254 GKVILDNIISGKFRRDVDPFVRPGPDPDRGGGGSGPSPISPRPTTEPQDFYE-------LR---- 307

  Fly   995 TEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPV--VQWRRPHEINCDGGAY 1057
                       ..|.::..||.|..|.....||:::.       .|.  |:|.||.||..:    
 Worm   308 -----------DQCLESKRLFEDPQFLANDSSLFFSK-------RPPKRVEWLRPGEITRE---- 350

  Fly  1058 PPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ---GAYQVRLCKDGK 1119
             |..:.......|:.||.||:||||:|.|.|..:::|...|:...:...:   |.:..:..:.||
 Worm   351 -PQLITEGHSRFDVIQGELGDCWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFHFQFWQYGK 414

  Fly  1120 WTTVLVDDLLPCDKRGHLVY-SQAKRKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPC 1183
            |..|::||.|| ...|.|:| ..|...:.|..|:|||.||:.|.||||..|...|.|..:||...
 Worm   415 WVDVVIDDRLP-TSNGELLYMHSASNNEFWSALLEKAYAKLFGSYEALKGGTTSEALEDMTGGLT 478

  Fly  1184 ESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQK---GLRPRH 1245
            |.|.|:     .|..:          |:......|.|| |..|.:::.|...::.|   ||...|
 Worm   479 EFIDLK-----NPPRN----------LMQMMMRGFEMG-SLFGCSIEADPNVWEAKMSNGLVKGH 527

  Fly  1246 AYSVLDVKDIQGHR----LLKLRNPWGH-YSWRGDWSDDSSLW---TDDLRDALMPHGASEGVFW 1302
            |||:...:.:.|..    :|::|||||: ..|.|.|||:|..|   .|.::..:......:|.||
 Worm   528 AYSITGCRIVDGPNGQTCILRIRNPWGNEQEWNGPWSDNSREWRSVPDSVKQDMGLKFDHDGEFW 592

  Fly  1303 ISFEDVLNYFDCIDICKV--------------------------RSGWNEVRLQGTLQPLCSISC 1341
            :||:|.:..|:.::||.:                          ...|...:..|..:...:...
 Worm   593 MSFDDFMRNFEKMEICNLGPDVMDEVYQMTGVKAAGMVWAANTHDGAWVRNQTAGGCRNYINTFA 657

  Fly  1342 ------VLLTVLEPTEAE------FTLFQEGQRNSEKSQRSQLDLCVVIFRTRSPAAPEIGRLVE 1394
                  |.||..:|.:.:      |.:.|:.:||.::.....:.:...::    .|....|||.:
 Worm   658 NNPQFRVQLTDSDPDDDDELCTVIFAVLQKYRRNLKQDGLDNVPIGFAVY----DAGNNRGRLSK 718

  Fly  1395 H----SKRQVR--GFVGCHKMLER-----DIYLLVCLAFNHWHTGIEDPHQYPQCILAIHSSKRL 1448
            .    :|..:|  .|:...:|..|     ..|::|...|        :|::..:.:|.::::..:
 Worm   719 QFFAANKSAMRSAAFINLREMTGRFRVPPGNYVVVPSTF--------EPNEEAEFMLRVYTNGFI 775

  Fly  1449 LVEQI 1453
            ..|::
 Worm   776 ESEEL 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:395516
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:395516
zf-RanBP 643..672 CDD:395516
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:395516
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:395516
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:395516 2/26 (8%)
CysPc 1001..1328 CDD:128526 102/369 (28%)
clp-1NP_498741.3 Peptidase_C2 317..609 CDD:459889 98/320 (31%)
calpain_III 631..778 CDD:214786 24/158 (15%)
Blue background indicates that the domain is not in the aligned region.

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