DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and Capn8

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_570960.2 Gene:Capn8 / 170725 MGIID:2181366 Length:703 Species:Mus musculus


Alignment Length:647 Identity:161/647 - (24%)
Similarity:232/647 - (35%) Gaps:229/647 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   990 RQLEETEALTKWQNIIQY-----------CRDNSELFVDDSFPPAPKSLYY---NPASGAGEGNP 1040
            :|....:.|...||.::|           |.::..||.|..||..|.:|.|   .|.|...:|  
Mouse    10 KQRAAAQGLGSNQNAVKYLGQDFETLRKQCLNSGVLFKDPEFPACPSALGYRDLGPGSAETQG-- 72

  Fly  1041 VVQWRRPHEINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEIC 1105
             :.|:||.|: |....:......||    ||.||.||:||||:|:|.|...|.|:..| |.::..
Mouse    73 -IIWKRPTEL-CSNPQFIVGGATRT----DIRQGGLGDCWLLAAIASLTLNEKLLYRV-VPRDQS 130

  Fly  1106 GQ----GAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAKR-KQLWVPLIEKAVAKIHGCYEA 1165
            .|    |.:..:..:.|:|..|::||.|| .|.|.|::..::. .:.|..|:|||.||::|.|||
Mouse   131 FQKNYAGIFHFQFWQYGEWVEVVIDDRLP-TKNGQLLFLHSEEGNEFWSALLEKAYAKLNGSYEA 194

  Fly  1166 LVSGRAIEGLATLTGAPCESIPLQ--ASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGN 1228
            |..|..|||....||...|...|:  ..:|....:..|.|.             .|:|.|....|
Mouse   195 LAGGSTIEGFEDFTGGISEFYDLRKPPGNLYYTIQKALRKG-------------SLLGCSIDVSN 246

  Fly  1229 MKVDEEEYQQKGLRPRHAYSVLDVK--DIQG--HRLLKLRNPWGHYSWRGDWSDDSSLWT--DDL 1287
            ....|...:|| |...|||||..|:  |.:|  .:|::||||||...|.|.|||.:..|.  |..
Mouse   247 AAEAEATTRQK-LVKGHAYSVTGVEEVDFRGLPEKLIRLRNPWGEVEWTGAWSDSAPEWNYIDPQ 310

  Fly  1288 RDALMPHGASEGVFWISFEDVLNYFDCIDICKVRSG---------WN------------------ 1325
            :...:...|.:|.||:||.|.|..|..::||.:...         ||                  
Mouse   311 KKGELDKRAEDGEFWMSFSDFLKQFSRLEICNLSPDSLSSEEIHKWNLVLFNGRWTRGSTAGGCQ 375

  Fly  1326 --------------------EVRLQGTLQPLCSISCVLLTVLE---------------------- 1348
                                |.:.:||.:|.|:   |||.:::                      
Mouse   376 NYPATYWTNPQFKIHLDEVDEDQEEGTSEPCCT---VLLGLMQKNRRRQRRIGQGMLSIGYAVYQ 437

  Fly  1349 -PTEAEFTL-------FQEGQRNS----------EKSQRSQL------------------DLCVV 1377
             |.|.|...       |.:|::.|          |.|.|.||                  |.|:.
Mouse   438 IPKELENHTDEHLGRDFFQGRQPSTCSSTYMNLREVSSRVQLPPGQYLVVPSTFEPFKDGDFCLR 502

  Fly  1378 IFRTRSPAAPEIGRLV----------------EH----------------------------SKR 1398
            :|..:...|.|||..|                ||                            |||
Mouse   503 VFSEKKAQALEIGDAVAGDPHEPHPRDMDGEDEHFWSLSEEFADKDSEISAHQLKRVLNGLLSKR 567

  Fly  1399 QVRGFVG-----CHKMLE---------------RDIYLLVC------LAFNHWHTGIEDPHQ 1434
            ....|.|     |.:|:.               :.::|.:|      ...:|...|..|.|:
Mouse   568 TDMKFDGFNINTCREMISLLDGDGTGSLRPVEFKTLWLKICKYLEIYQEMDHSRAGTIDAHE 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 118/400 (30%)
Capn8NP_570960.2 Peptidase_C2 46..342 CDD:279042 109/319 (34%)
Domain III 355..512 24/159 (15%)
Calpain_III 356..509 CDD:279416 24/155 (15%)
Linker. /evidence=ECO:0000250 513..531 4/17 (24%)
Domain IV. /evidence=ECO:0000250 532..703 15/98 (15%)
EFh 580..635 CDD:298682 8/50 (16%)
PTZ00183 611..>692 CDD:185503 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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