DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sol and Capn7

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_033926.1 Gene:Capn7 / 12339 MGIID:1338030 Length:813 Species:Mus musculus


Alignment Length:306 Identity:98/306 - (32%)
Similarity:152/306 - (49%) Gaps:49/306 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1043 QWRRPHEINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ 1107
            :|.||.::..:     |..:: |.....|.|.::.:|..:::||:.|..|....:.|:|..|..|
Mouse   260 KWVRPEDLTNN-----PTMIY-TVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQ 318

  Fly  1108 -----------GAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAKRK-QLWVPLIEKAVAKIH 1160
                       |.|.|:|..:|....|::||.||.|.:|.|:.|.:..| :|||.|||||..|:.
Mouse   319 NKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVM 383

  Fly  1161 GCYEALVSGRAIEGLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRF-----LM 1220
            |.|:...|...|: |..|||...|.|.:.:.|      ....||..:..|..    ||     |:
Mouse   384 GGYDFPGSNSNID-LHALTGWIPERIAMHSDS------QTFSKDNSFRMLYQ----RFHKGDVLI 437

  Fly  1221 GASCGGGNMKVDEEEYQQKGLRPRHAYSVLDVKDIQGHRLLKLRNPWGHYSWRGDWSD-DSSLWT 1284
            .||.|    .:.|.|.::.||.|.|||:|||:::.:|.|.::|:|||.|..|:|.:|: |...||
Mouse   438 TASTG----VMTEAEGEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYSENDVKNWT 498

  Fly  1285 DDLRDALM--PHGASE---GVFWISFEDVLNYFDCIDICKVRSGWN 1325
            .:|:..|.  |..|.:   |:||||::|:..|:|.:.:     .||
Mouse   499 PELQKYLNFDPRTAQKIDNGIFWISWDDLCQYYDVVYL-----SWN 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 98/306 (32%)
Capn7NP_033926.1 MIT_calpain7_1 5..76 CDD:239144
MIT 85..157 CDD:294211
CysPc 214..538 CDD:238004 96/303 (32%)
Domain III 541..701
calpain_III 687..810 CDD:214786
Domain N 702..813
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.