DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and Capn6

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:NP_031629.3 Gene:Capn6 / 12338 MGIID:1100850 Length:641 Species:Mus musculus


Alignment Length:622 Identity:153/622 - (24%)
Similarity:245/622 - (39%) Gaps:169/622 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   984 KLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYN---PASGAGEGNPVVQWR 1045
            ||.:|          .|:|.:.|.|..:..||.|.:|.|...||::|   |..        |.|:
Mouse     6 KLFKN----------QKYQELKQECMKDGRLFCDPTFLPENDSLFFNRLLPGK--------VVWK 52

  Fly  1046 RPHEINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTKEICGQ--- 1107
            ||.:|:.|     |..:........:.||.|||..::||.:.||     |:|...||.|...   
Mouse    53 RPQDISDD-----PHLIVGNISNHQLIQGRLGNKAMISAFSCLA-----VQESHWTKAIPNHKDQ 107

  Fly  1108 -----------GAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVYS-QAKRKQLWVPLIEKAVAKIH 1160
                       |.:..|....|:||.|::||||| ...|.||:| .....:.|..|:|||.||:.
Mouse   108 EWDPRKPEKYAGIFHFRFWHFGEWTEVVIDDLLP-TINGDLVFSFSTSMNEFWNALLEKAYAKLL 171

  Fly  1161 GCYEALVSGRAIEGLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGA--S 1223
            ||||||......:.:...||...|.|.:|........|   :|..::.:|..:    |..|.  .
Mouse   172 GCYEALDGLTITDIIMDFTGTLAEIIDMQKGRYTDLVE---EKYKLFGELYKT----FTKGGLIC 229

  Fly  1224 CGGGNMKVDEEEYQQK-GLRPRHAYSVLDVKDIQ-GHRL-----------LKLRNPWGHYSWRGD 1275
            |...:...:|:|.:.. ||...:.|::.|::.:: |.||           ::||||.|...|.|.
Mouse   230 CSIESPSQEEQEVETDWGLLKGYTYTMTDIRKLRLGERLVEVFSTEKLYMVRLRNPLGRQEWSGP 294

  Fly  1276 WSDDSSLW-----TDDLRDALMPHGASEGVFWISFEDVLNYFDCIDICKVRSGWNEVRLQGTLQP 1335
            ||:.|..|     ||.....|:.  :.:|.||:|.||..:.|..:::|  |:..|.|..:..|:.
Mouse   295 WSEISEEWQQLTVTDRKNLGLVM--SDDGEFWMSLEDFCHNFHKLNVC--RNVNNPVFGRKELES 355

  Fly  1336 LCSISCVLL-----------------TVLEPTEAEFTLFQEGQRNSEKSQRSQLDLCVVIFRT-R 1382
            :  :.|..:                 |.|:..:..||:.::|.:.....|:..|       || |
Mouse   356 V--VGCWTVDDDPLMNRSGGCYNNRDTFLQNPQYIFTVPEDGHKVIMSLQQKDL-------RTYR 411

  Fly  1383 SPAAPE---IG---RLVEHSKR--------QVRGFVGCH---------KMLERDIYLLVCLAFNH 1424
            ....|:   ||   ..||.::|        |.|.....:         |.|::..|:||...|.|
Mouse   412 RMGRPDNYIIGFELFKVEMNRRFRLHHLYIQERAGTSTYIDTRTVFLSKYLKKGSYVLVPTMFQH 476

  Fly  1425 WHTGIEDPHQYPQCILAIHSSKRLLVEQISPSPHLLADAIISLTLTKGQRHEGREGMTAYYLTKG 1489
            ..|                  ...|:...|..|..|.:  ::|.:.|         |:.:.|.:|
Mouse   477 GRT------------------SEFLLRIFSEVPVQLRE--LTLDMPK---------MSCWNLARG 512

  Fly  1490 WAGLVVMV--------ENRHENKWIH----VKCDCQE 1514
            :..:|..:        |.::.|:.::    :||..:|
Mouse   513 YPKVVTQITVHSAEGLEKKYANETVNPYLIIKCGKEE 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 105/364 (29%)
Capn6NP_031629.3 CysPc 13..351 CDD:128526 106/367 (29%)
Domain III 344..495 33/177 (19%)
Calpain_III 349..497 CDD:238132 32/176 (18%)
C2_Calpain 514..639 CDD:176011 6/36 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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