DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn10l

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_031758129.1 Gene:capn10l / 100497805 XenbaseID:XB-GENE-5889689 Length:708 Species:Xenopus tropicalis


Alignment Length:487 Identity:113/487 - (23%)
Similarity:184/487 - (37%) Gaps:128/487 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1014 LFVDDSFPPAPKSL---------YYNPASGAGEGNPVVQWRRPHEINC-------DGGAYPPWAV 1062
            ||.|:.||...:.:         .:|           ::||||.|. |       ||.:|     
 Frog    42 LFNDEEFPADMRVIGPHLIDEFKIHN-----------MEWRRPPEF-CKNPHLIVDGASY----- 89

  Fly  1063 FRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVL-----VTKEICGQGAYQVRLCKDGKWTT 1122
                  .||.|..:|:||:||.:..:.:::.|::.::     .|:...  |.:..|....|||..
 Frog    90 ------FDIVQSKIGDCWVLSTIGSVTQKQTLLRNIIPADQGFTRNYA--GIFHFRFWYSGKWVD 146

  Fly  1123 VLVDDLLPCDKRGHLVYSQAKRKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIP 1187
            |::||.||...........:..|:.|..|:|||.||:.|.|:.|..|...|.|...|||...::.
 Frog   147 VVIDDRLPFLNGDFFSVRASCAKEYWPCLLEKAYAKLLGSYQNLHWGDPAEALVNFTGALTLTLK 211

  Fly  1188 LQASSLPMPSEDELDKDLIWAQLLSS------RCV-----------RFLMGASCGGGN------- 1228
            |:..        :|....||..:..|      .|:           |:.:.::..|.:       
 Frog   212 LKGG--------DLHHSDIWEMVHKSSQKALITCISEKAEVMTHNRRYSVPSAMEGRDERRRSDP 268

  Fly  1229 -MKVDEEEYQQKGLRPRHAYSVLDVKDIQGH---RLLKLRNPWGHYSWRGDWSDDSSLWTD-DLR 1288
             .|..|..:...||..||||:|.|...:...   .|::|.||||...|.|.|||:.|.|.| |..
 Frog   269 ANKYIENIHVDNGLVDRHAYTVTDTAQVYREGCVNLIRLWNPWGRGEWIGRWSDNCSWWNDIDPE 333

  Fly  1289 DALMPHGASE-GVFWISFEDVLNYFDCIDIC----------KVRSGWNEVRLQGTLQP------- 1335
            |....:...| |.||:|:|..:..|..:.||          :.:..|::...: .:.|       
 Frog   334 DRKKLNTKREDGEFWMSWETFVQQFSRVIICSPTLDFLNWGRDQRSWHKTSYE-NIWPKASGLED 397

  Fly  1336 ------LCSISCVLLTVLEPTEAE------FTLFQEGQRNSEKSQRSQLDLCVVIFRTRSPAAPE 1388
                  .|.....|:.:....|.:      .:|.| ..||.:|..|..|.:..::.:..:     
 Frog   398 SFNKDLFCKNPQYLIRISPSDEVQKGYNVIISLMQ-NHRNRQKFGRGWLPIGFLVSKVDA----- 456

  Fly  1389 IGRLVEHSKRQVRGFV------GCHKMLERDI 1414
              .|.:..::....|.      |.|...:||:
 Frog   457 --ELPDPQRKMPGSFFLKDLQSGIHINKQRDV 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 96/374 (26%)
capn10lXP_031758129.1 Peptidase_C2 43..365 CDD:395523 93/354 (26%)
Calpain_III 400..517 CDD:395848 16/95 (17%)
EFh_PEF_CAPN13_14 541..708 CDD:320070
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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