DRSC/TRiP Functional Genomics Resources

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Protein Alignment sol and capn5b

DIOPT Version :9

Sequence 1:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster
Sequence 2:XP_009293672.1 Gene:capn5b / 100006332 ZFINID:ZDB-GENE-091116-29 Length:659 Species:Danio rerio


Alignment Length:553 Identity:148/553 - (26%)
Similarity:235/553 - (42%) Gaps:117/553 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1001 WQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPV--VQWRRPHEINCDGGAYPPWAVF 1063
            :..:.:.|..:..||.|..||....||:|       :||.:  |.|:||.|: ||    .|....
Zfish    13 YSTLKRQCLQSGALFEDPLFPAVDDSLFY-------QGNRIGRVHWKRPEEL-CD----DPHLFV 65

  Fly  1064 RTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVL---------VTKEICGQGAYQVRLCKDGK 1119
            ......|:.||.|||||.::|.:.||.||.|.::|:         ..|.....|.:..|..:.|:
Zfish    66 DGISAHDLHQGQLGNCWFVAACSSLASRESLWQKVIPDWKEQEWDPEKADSYAGIFHFRFWRFGE 130

  Fly  1120 WTTVLVDDLLP-CDKRGHLVYSQAK-RKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAP 1182
            |..|::||.|| .|.:  |||..:. ..:.|..|:|||.||::||||||..|...:.|...||..
Zfish   131 WVDVVIDDRLPTVDNQ--LVYCHSNDSNEFWSALVEKAYAKVYGCYEALDGGNTADALVDFTGGV 193

  Fly  1183 CESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGLRPRHAY 1247
            .|.:.|.....   ::||..::.::.::|.......|:..|.....:: |.|.....||...|||
Zfish   194 SEPMDLLEGQF---AQDETARNQLFERVLKVHNRDGLISCSIRATTVE-DMEARLDCGLVKGHAY 254

  Fly  1248 SVLDVKDIQ-GHRLL-----------KLRNPWGHYSWRGDWSDDSSLW---TDDLRDALMPHGAS 1297
            :|.||:.:: ||.||           ::|||||...|.|.|||.|..|   :...|:.|......
Zfish   255 AVTDVRKVRLGHGLLAYFKSEKLHMIRMRNPWGEKEWSGPWSDSSEEWKKVSKSEREKLGVTVQD 319

  Fly  1298 EGVFWISFEDVLNYFDCIDICK--------VRSGWNEVRLQGTL----QPLCSIS--CV--LLTV 1346
            :|.||::|||..:||..:.:|:        :...|.|..::|..    :||.:.:  |:  ..|.
Zfish   320 DGEFWMNFEDFCHYFTDLILCRLINTSYLSIHKTWEEEVMRGLWLHRDEPLRNRAGGCINHKTTF 384

  Fly  1347 LEPTEAEF-----------TLFQEGQRNSEKSQRSQ-LDLCVVIFRTRSPAAPEIGRLVE-HSKR 1398
            |:..:..|           .|.|:.:|.:.|..:.: |.:...|.|.      |:.|... ||.:
Zfish   385 LQNPQYVFDVRKVEDEVLICLQQKERRATPKEGKGENLAIGFDIHRV------ELNRKYRMHSAQ 443

  Fly  1399 Q-VRGFV----GC---HKMLERDIYLLVCLAFNHWHTG------------------IEDPHQ--- 1434
            | |.|.:    .|   .|.|:...|:::...|:....|                  :::|.|   
Zfish   444 QKVAGSIYINSRCVFLRKELKEGRYVIIPTTFDPGQQGEFLLRVFTDVPSDCKELTLDEPPQTCW 508

  Fly  1435 -----YPQCILAIH--SSKRLLVEQISPSPHLL 1460
                 |||.:..:|  |::.|..:..:...|.|
Zfish   509 TGMCGYPQLVTQVHVLSAEGLQGQDANGELHCL 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
solNP_476738.3 zf-RanBP 6..34 CDD:279035
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:279035
zf-RanBP 643..672 CDD:279035
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:279035
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:279035
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:279035
RanBP2-type Zn finger 931..950 CDD:275376
CysPc 1001..1328 CDD:128526 111/362 (31%)
capn5bXP_009293672.1 Peptidase_C2 27..341 CDD:279042 106/331 (32%)
Calpain_III 354..493 CDD:279416 29/144 (20%)
C2_Calpain 515..657 CDD:176011 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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