DRSC/TRiP Functional Genomics Resources

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Protein Alignment sls and Mybpc3

DIOPT Version :9

Sequence 1:NP_001261304.1 Gene:sls / 44013 FlyBaseID:FBgn0086906 Length:18468 Species:Drosophila melanogaster
Sequence 2:NP_032679.2 Gene:Mybpc3 / 17868 MGIID:102844 Length:1278 Species:Mus musculus


Alignment Length:1269 Identity:318/1269 - (25%)
Similarity:508/1269 - (40%) Gaps:246/1269 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly 16967 FSKKPKAQYVDENTNVILECRLVAVPEPD---IVWTFNGEDIDEEEIKNVRIVTESDMHMYCSVV 17028
            |:|||::..|...:..:.|    |..|..   :.|..:|.||...:  ...:..|...|    .:
Mouse    20 FNKKPRSAEVTAGSAAVFE----AETERSGVKVRWQRDGSDITAND--KYGLAAEGKRH----TL 74

  Fly 17029 HISKVKKSQEGTYEVIATNREGEARLPITLKVRTTDKEAPQILEPLRNMVIREGESVVLSTQIVG 17093
            .:.......:|:|.|||    |.:::...|||  |:...|:..|                :::..
Mouse    75 TVRDASPDDQGSYAVIA----GSSKVKFDLKV--TEPAPPEKAE----------------SEVAP 117

  Fly 17094 NPPPKVTWYKDGKPVKNAKSDKDLHTLTLITPQKSEKGEYTVKAVNPLGSVETTANLTIEEPAGG 17158
            ..|.:|                         |..:.:.|.:|.  :|.|||..|.:.:..|..|.
Mouse   118 GAPKEV-------------------------PAPATELEESVS--SPEGSVSVTQDGSAAEHQGA 155

  Fly 17159 NAEP-PLFVERFEEQNVPQKGEIRLPAKVSGNPV---PEVQWLFNNTPLFPSERIQQ------VY 17213
            ..:| .||:.|.::..|...|.|...|:|:|..:   |.|:| |....:..|.::.|      .|
Mouse   156 PDDPIGLFLMRPQDGEVTVGGSIVFSARVAGASLLKPPVVKW-FKGKWVDLSSKVGQHLQLHDSY 219

  Fly 17214 DGEN----IELIIKDANPETDSGDYKCIASNP-------IGKTSHGARVIVEVD----------- 17256
            |..:    .||.|.||. .|.:|.|:|..|..       ...|.|.|....::|           
Mouse   220 DRASKVYLFELHITDAQ-TTSAGGYRCEVSTKDKFDSCNFNLTVHEAIGSGDLDLRSAFRRTSLA 283

  Fly 17257 --------------EVTFTKKLKKTITIEEVQSLTLECETSHVVTTKWFFNGKELSGMDHRVVVE 17307
                          .:.|:..|||..:......|....|..     .|....:.......|:..:
Mouse   284 GAGRRTSDSHEDAGTLDFSSLLKKRDSFRRDSKLEAPAEED-----VWEILRQAPPSEYERIAFQ 343

  Fly 17308 DGKTHKLVIRNTNLRDSGTYTCKVKKQETQSTVEVLQRKPDFIKVLED-YEVTEKDTAILDVELT 17371
            .|.|.   :|....|..|     :|:.|.:||.        |.|.||. |:|.:.....|.|||.
Mouse   344 HGVTD---LRGMLKRLKG-----MKQDEKKSTA--------FQKKLEPAYQVNKGHKIRLTVELA 392

  Fly 17372 TEATEVTWYKDGEKITPENKNVEFIKDGKARRLVIRDVTIHDEGQYTCKIEGQECSCELVVIELP 17436
            ....||.|.|:|::|........|...|..|.|.|...::.|:..|.|.:.|::||.||.|.|.|
Mouse   393 DPDAEVKWLKNGQEIQMSGSKYIFESVGAKRTLTISQCSLADDAAYQCVVGGEKCSTELFVKEPP 457

  Fly 17437 PEIVEPLNDVAVTKGENAVFEVELSKGDALVKWFKNGKEIVFNE--RIQLAIDGKKQSLRIVKAK 17499
            ..|...|.|..|..|:...||.|:|:..|.|||.|:|.|:...|  :.:...||:|..|.|.:|.
Mouse   458 VLITRSLEDQLVMVGQRVEFECEVSEEGAQVKWLKDGVELTREETFKYRFKKDGRKHHLIINEAT 522

  Fly 17500 PEDVGEYSVQVGEQTSKAKLTVEEPLVDFVIRLPDITLATKTTDAEFTVQLSQPDVEVTWCKKGK 17564
            .||.|.|:|:.....|.|:|.|:|..::....:.|:.:..| ..|.|..::|..:|...|.|.||
Mouse   523 LEDAGHYAVRTSGGQSLAELIVQEKKLEVYQSIADLAVGAK-DQAVFKCEVSDENVRGVWLKNGK 586

  Fly 17565 PIKPNQKHEVFVEGTVRRLVIHDASDEDAGEISCVAENVTS--STKLCVEELKL-------PPVI 17620
            .:.|:.:.:|...|.|.:|.|.|.:..|..:.|.|.|....  |.||...|:|:       ||.|
Mouse   587 ELVPDNRIKVSHIGRVHKLTIDDVTPADEADYSFVPEGFACNLSAKLHFMEVKIDFVPRQEPPKI 651

  Fly 17621 TSD----KDQTIKVKENDDVTFTVKYTGVPTPEACWTTRKVVIPKSKRT---------------- 17665
            ..|    ...||.|...:.:...|..:|.|.|...|  :|.|....|.:                
Mouse   652 HLDCPGSTPDTIVVVAGNKLRLDVPISGDPAPTVVW--QKTVTQGKKASTGPHPDAPEDAGADEE 714

  Fly 17666 ----------------IPTIDEQSAKLTIKKVVDDDEGEYTVKLVNPVGEAEASLHLVIMRKPTA 17714
                            :.|..::|. .|::....:|||.|||.:.|||||.:.:|.:.::..|.|
Mouse   715 WVFDKKLLCETEGRVRVETTKDRSV-FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVIDVPDA 778

  Fly 17715 PGTPQPLEIMHDSITLYWKAPEDDGKSEIIEYILEYQDVKEEKWTEIR--KIKDTTYTISKLKID 17777
            |..|:...:..||.|:.|:.|..||...::.||||.:..|..:|..:.  .:::.::...::...
Mouse   779 PAAPKISNVGEDSCTVQWEPPAYDGGQPVLGYILERKKKKSYRWMRLNFDLLRELSHEARRMIEG 843

  Fly 17778 TEYVFRSIAVNEVGPSPPSPLSPPIRLV-PKVETKAPSVQEPLQDVVSELDKEVTLSCVFGGIPE 17841
            ..|..|..|||.||.|.|||.|.|...: |..|....:|::.....||                 
Mouse   844 VAYEMRVYAVNAVGMSRPSPASQPFMPIGPPGEPTHLAVEDVSDTTVS----------------- 891

  Fly 17842 PKVTWKKNGQV----FESRSIRY-ENRVAKYT------IEKTT-----IETEA--TYTCVATNEK 17888
              :.|:...:|    .:..|:.| :...:::|      .|:|:     :.|.|  .:...|.|..
Mouse   892 --LKWRPPERVGAGGLDGYSVEYCQEGCSEWTPALQGLTERTSMLVKDLPTGARLLFRVRAHNVA 954

  Fly 17889 G------SAETSCRLKLQQKPVLEVEDKYLTQKL--RTGSILTIPATVRGYPQPTVTWHKETIEQ 17945
            |      :.|.....::.|:|.|:: .::|.|.:  :.|..:.:....:|.|:|.|||.||. :.
Mouse   955 GPGGPIVTKEPVTVQEILQRPRLQL-PRHLRQTIQKKVGEPVNLLIPFQGKPRPQVTWTKEG-QP 1017

  Fly 17946 KTTKSVTIETTETTSTYTVKKVTREQSGKYKVTATNESGTTYVECTVQVIDKPSRPQSLEIKDIK 18010
            ...:.|:|..:.|.:...::...|..||.|:||...|:........:|::||||.||.:.|.:..
Mouse  1018 LAGEEVSIRNSPTDTILFIRAARRTHSGTYQVTVRIENMEDKATLILQIVDKPSPPQDIRIVETW 1082

  Fly 18011 KDSIVLEWTPPVDDGGLDIEKYTLEKCDVQNNVWMKVSDFNKDIKSY-----AVQKLSMNAQYMF 18070
            ..::.|||.||.|||..:|..||::|.|.:...|..|      ::.|     .|.:|.:...|.|
Mouse  1083 GFNVALEWKPPQDDGNTEIWGYTVQKADKKTMEWFTV------LEHYRRTHCVVSELIIGNGYYF 1141

  Fly 18071 RVVAANPIGESEPTES--DPVTITKKFEKPSPPR 18102
            ||.:.|.:|.|:...:  :||.|.:......||:
Mouse  1142 RVFSHNMVGSSDKAAATKEPVFIPRPGITYEPPK 1175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slsNP_001261304.1 I-set 87..174 CDD:254352
Ig 109..175 CDD:143165
Ig 254..334 CDD:299845
I-set 255..344 CDD:254352
I-set 372..462 CDD:254352
Ig 390..463 CDD:299845
Ig 471..561 CDD:299845
I-set 471..560 CDD:254352
I-set 618..709 CDD:254352
Ig 645..705 CDD:143165
DUF1136 715..741 CDD:284093
IG_like 762..843 CDD:214653
Ig 779..835 CDD:143165
I-set 890..982 CDD:254352
Ig 918..979 CDD:143165
DUF1136 988..1014 CDD:284093
I-set 1024..1116 CDD:254352
Ig 1058..1113 CDD:143165
I-set 1158..1250 CDD:254352
Ig 1178..1246 CDD:143165
DUF1136 1256..1282 CDD:284093
I-set 1291..1380 CDD:254352
IGc2 1304..1372 CDD:197706
DUF1136 1388..1414 CDD:284093
I-set 1424..1515 CDD:254352
Ig 1442..1513 CDD:143165
DUF1136 1522..1548 CDD:284093
I-set 1558..1645 CDD:254352
IGc2 1571..1639 CDD:197706
DUF1136 1655..1679 CDD:284093
I-set 1691..1782 CDD:254352
IGc2 1718..1772 CDD:197706
DUF1136 1788..1814 CDD:284093
I-set 1824..1916 CDD:254352
IGc2 1838..1906 CDD:197706
DUF1136 1922..1948 CDD:284093
I-set 1958..2049 CDD:254352
Ig 1985..2044 CDD:143165
I-set 2089..2181 CDD:254352
IGc2 2103..2171 CDD:197706
DUF1136 2187..2213 CDD:284093
I-set 2222..2314 CDD:254352
IGc2 2236..2304 CDD:197706
DUF1136 2320..2346 CDD:284093
I-set 2356..2448 CDD:254352
Ig 2384..2445 CDD:143165
DUF1136 2454..2480 CDD:284093
I-set 2488..2580 CDD:254352
Ig 2516..2576 CDD:143165
I-set 2622..2714 CDD:254352
IGc2 2636..2704 CDD:197706
I-set 2754..2844 CDD:254352
Ig 2771..2840 CDD:143165
IGc2 2908..2974 CDD:197706
I-set 3029..3120 CDD:254352
Ig 3057..3116 CDD:143165
I-set 3130..3220 CDD:254352
Ig 3148..3219 CDD:143165
I-set 3263..3354 CDD:254352
I-set 3401..3493 CDD:254352
Ig 3429..3490 CDD:143165
I-set 3539..3630 CDD:254352
Ig 3556..3625 CDD:143165
I-set 3676..3767 CDD:254352
IGc2 3690..3758 CDD:197706
I-set 3811..3900 CDD:254352
Ig 3828..3899 CDD:143165
I-set 3954..4046 CDD:254352
Ig 3963..4042 CDD:299845
I-set 4092..4180 CDD:254352
Ig 4102..4172 CDD:299845
I-set 4394..4483 CDD:254352
Ig 4411..4480 CDD:143165
I-set 4497..4581 CDD:254352
Ig 4519..4580 CDD:143165
I-set 4604..4693 CDD:254352
Ig 4621..4691 CDD:299845
I-set 4702..4792 CDD:254352
Ig 4702..4791 CDD:299845
COG4372 4996..>5260 CDD:226809
I-set 6536..6622 CDD:254352
Ig 6554..6622 CDD:143165
Ig 6654..6725 CDD:143165
I-set 6743..6829 CDD:254352
Ig 6760..6829 CDD:299845
I-set 6841..6928 CDD:254352
Ig 6858..6927 CDD:143165
I-set 6942..7033 CDD:254352
IGc2 6957..7023 CDD:197706
I-set 7066..7157 CDD:254352
Ig 7084..7153 CDD:143165
IGc2 7224..7289 CDD:197706
Ehrlichia_rpt 14571..15030 CDD:118064
SH3_p47phox_like 16753..16807 CDD:212790
I-set 16841..16931 CDD:254352
Ig 16858..16931 CDD:299845
I-set 16965..17060 CDD:254352 21/95 (22%)
IGc2 16978..17050 CDD:197706 14/74 (19%)
I-set 17068..17152 CDD:254352 12/83 (14%)
Ig_2 17078..17152 CDD:290606 10/73 (14%)
IG_like 17170..17253 CDD:214653 27/102 (26%)
Ig 17180..17250 CDD:143165 24/89 (27%)
I-set 17260..17342 CDD:254352 17/81 (21%)
IGc2 17274..17331 CDD:197706 9/56 (16%)
I-set 17347..17432 CDD:254352 29/85 (34%)
IGc2 17367..17423 CDD:197706 17/55 (31%)
I-set 17437..17521 CDD:254352 31/85 (36%)
Ig <17468..17521 CDD:299845 20/54 (37%)
I-set 17528..17611 CDD:254352 24/84 (29%)
Ig 17553..17602 CDD:143165 15/48 (31%)
I-set 17618..17708 CDD:254352 29/125 (23%)
Ig 17635..17708 CDD:299845 23/104 (22%)
FN3 17712..17791 CDD:238020 22/80 (28%)
I-set 17813..17898 CDD:254352 16/108 (15%)
Ig 17830..17894 CDD:143165 13/87 (15%)
Ig 17922..17994 CDD:299845 18/71 (25%)
FN3 17998..18090 CDD:238020 31/98 (32%)
FN3 18098..18189 CDD:238020 2/5 (40%)
FN3 18207..18298 CDD:238020
FN3 18307..18398 CDD:238020
Mybpc3NP_032679.2 Ig 20..102 CDD:386229 21/95 (22%)
Ig 163..262 CDD:386229 26/100 (26%)
THB 324..357 CDD:375788 6/40 (15%)
Ig 369..453 CDD:386229 29/83 (35%)
Ig 460..544 CDD:386229 31/83 (37%)
Ig 557..621 CDD:386229 19/64 (30%)
Ig_C5_MyBP-C 660..772 CDD:143302 26/114 (23%)
FN3 776..866 CDD:238020 28/89 (31%)
FN3 874..967 CDD:238020 17/111 (15%)
Ig_Titin_like 994..1066 CDD:319305 18/72 (25%)
FN3 1070..1153 CDD:238020 29/88 (33%)
I-set 1185..1274 CDD:369462
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.918296 Normalized mean entropy S8067
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.950

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