DRSC/TRiP Functional Genomics Resources

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Protein Alignment sls and myom1b

DIOPT Version :9

Sequence 1:NP_001261304.1 Gene:sls / 44013 FlyBaseID:FBgn0086906 Length:18468 Species:Drosophila melanogaster
Sequence 2:XP_009301915.1 Gene:myom1b / 100144770 ZFINID:ZDB-GENE-080416-2 Length:1646 Species:Danio rerio


Alignment Length:1144 Identity:237/1144 - (20%)
Similarity:389/1144 - (34%) Gaps:337/1144 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly 17322 RDSGTYTCKVKKQETQS-TVEVLQRKPDFIKVLEDYEVTEKDTAILDVELTTEATEVTWYKDGEK 17385
            |...||....|:.:... .|.:.:...||...|.|.|             ...|.....|..|.:
Zfish    67 RAKPTYLAMDKENQIIGYVVPIFRGSHDFASGLSDSE-------------EARAKVSAGYVSGRE 118

  Fly 17386 ITPENKNVEFIKDGKARRLVIRDVT--------IHDEGQYTCKIEGQECSCELVVIELPPEIVEP 17442
            :....     ::..::||.|:|:..        ||:..:|. |.:.::.     ::..|..:::|
Zfish   119 LFSSG-----VESERSRRTVMRESAERIQLSKRIHENEEYH-KRQNEDS-----LMHTPEFVIKP 172

  Fly 17443 LNDVAVTKGENAVFEVELSK--------GDALVKWFKNGKEIVFNERIQLAID-----GKKQ--- 17491
            .:        :.|:|.:..:        .|..|.|:||          .::||     ||.:   
Zfish   173 RS--------HTVWEKQCVRLHCTISGWPDPRVVWYKN----------NVSIDPMSNPGKYKVES 219

  Fly 17492 -----SLRIVKAKPEDVGEYSVQV----GEQTSKAKLTVEEPLVDFVIRLPDITLATKTTDAEFT 17547
                 ||.|.:...:|..:|.|..    ||.::.|.:.|                  |....||.
Zfish   220 SYNVHSLEINRCDFDDTAQYRVSAMNSKGENSAYASVVV------------------KRFKGEFD 266

  Fly 17548 VQLSQPDVEVTWCKKGKPIKPNQKHEVFVEGTVRRLVIHDASDEDAGEISCVAENVTSSTKLCVE 17612
            ..|..|.::                                |.:...:..|:...||..|.:.  
Zfish   267 ESLPSPRLQ--------------------------------SRKFGFQAPCLEYGVTFETHIV-- 297

  Fly 17613 ELKLPPVITSDKDQTIKVKENDDVTFTVKYTGVPT-----PEACW-TTRKVVIPKSKRTIPTIDE 17671
                      :|......:|.:.::|.......|:     ||..| ...|:::| ||........
Zfish   298 ----------EKFGVAFGREGETLSFGCSVIIYPSLQRFQPEIEWYRDDKLLVP-SKWVQMHWSG 351

  Fly 17672 QSAKLTIKKVVDDDEGEYTVKLVNPVGEAEASLHLVIMRKPT----APGTP---QPLEIMHDSIT 17729
            ..|.||:..:..:|||.||::::...|....|.::.:.....    |||.|   ..|:...|.:.
Zfish   352 DRATLTLTHLNKEDEGLYTLRVITKSGFQSHSAYVFVRDADADVAGAPGAPLDVHCLDANKDYVI 416

  Fly 17730 LYWKAPEDDGKSEIIEYILEYQDVKEEKWTEIR--KIKDTTYTISKLKIDTEYVFRSIAVNEVGP 17792
            :.||.|..||.|.|:.|.::..:|....|.:..  .:|...:.::.|.....|.||..|||:.|.
Zfish   417 VAWKQPAVDGGSAILGYFVDRCEVGTTHWAQCNDTPVKFARFPVTGLIEGRSYTFRVRAVNKAGM 481

  Fly 17793 SPPSPLSPPIRLVPKVETKAPSVQEPLQDVVSELDKEVTLSCVFGGIPEPKVTWKKNGQVFESRS 17857
            |.||.:|.|:..:...:........|                           |           
Zfish   482 SHPSRVSEPVAAMDPADRSRKGASAP---------------------------W----------- 508

  Fly 17858 IRYENRVAKYTIEKTTIETEATYTCVATNEKGSAETSCRLKLQQKPVLEVEDKYLTQKLRTGSIL 17922
                                                                        ||.|:
Zfish   509 ------------------------------------------------------------TGQII 513

  Fly 17923 TIPATVRGYPQPTVTWHKETIEQKTTKSVTIETTETTSTYTVKKVTREQSGKYKVTATNESGTTY 17987
                                                        ||.|:.               
Zfish   514 --------------------------------------------VTEEEP--------------- 519

  Fly 17988 VECTVQVIDKPSRPQSLEIKDIKKDSIVLEWTPPVDDGGLDIEKYTLEKCDVQNNVWMKVSDFNK 18052
            ||..|     |.|||.|.:.:..|:.:||.|.||.:.|...: .|.:|||....:.|.:|   |.
Zfish   520 VEGVV-----PGRPQELSVIEATKNYVVLSWKPPGEKGHEGV-MYYVEKCVSGTDSWQRV---NT 575

  Fly 18053 DI--KS--YAVQKLSMNAQYMFRVVAANPIGESEPTE-SDPVTITKKFEKPSPPRGPTTVSGMND 18112
            :|  ||  :|:..|:....|.|||...|..|..||:| :|..|:..|.:.||.| |....:...|
Zfish   576 EIPVKSPRFALFDLAEGKSYRFRVRCCNSAGVGEPSEPTDATTVGDKLDIPSAP-GRVVPTRNTD 639

  Fly 18113 TSFNLAWEPSETDGGSKIIEYIVEIREETETTYRSVGVTLGTVTNIHVEKVVRNKGYFFRIYARN 18177
            ||..::||.|.  ...:::.|.:|.......|:..........|......:...:.|.||:.|.|
Zfish   640 TSVVISWEASR--DAKELVGYYIESSIAGSNTWEPCNNKPVKATRFICHGLTTGESYVFRVRAVN 702

  Fly 18178 EVGTSEAFETTEKIVLGRKITNDNEALAPPSPPQNLRAPDVTSRSVTLDWEVPARNGGSEITGYC 18242
            ..|.||..:.:|.||:...| ......|.|:||..:...:....|:.|.|:.|...||::||||.
Zfish   703 AAGISEFSQESEAIVVKAAI-GGGVLHASPAPPYGISVLECVRDSMVLAWKQPTFIGGADITGYF 766

  Fly 18243 VEKRSSTS---TNWTKVITLDAHQLHYTIDNLKEKCEYWFRVSAENEVGLGAPAV-TESISLKTH 18303
            |:.|..|.   ..|.:.......:..|.:..|||...|.|:|.|.|..|:|.|:: :|:...:..
Zfish   767 VDYREVTGGVPGKWHEANIKAISERAYRVSELKENMLYQFQVRAANMAGVGIPSLPSETFKCEEW 831

  Fly 18304 A-TVPSPPTGPLEARVLAANAHIFEWGLPESDGGAPLLGYHIAIRDMKK--TMWIEVGRVPAGVL 18365
            . .||.|| ..|:.:.:..|:.:..|..|...|...:.||:|.|::.:.  .||..|........
Zfish   832 TIAVPGPP-HDLQVQEVRKNSLVLLWKPPVYQGRDAVNGYYIDIKEAEADFEMWRGVNEKATDKA 895

  Fly 18366 KFQIRDLQENHEYMIRIFAKNEIGLSEPLESEEPYKAMT 18404
            .|::.||:....|:.|:.|:|:.|:.:..:..||.:|:|
Zfish   896 FFKVNDLKGGESYVFRVRAQNKAGVGKASDPTEPVEAVT 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slsNP_001261304.1 I-set 87..174 CDD:254352
Ig 109..175 CDD:143165
Ig 254..334 CDD:299845
I-set 255..344 CDD:254352
I-set 372..462 CDD:254352
Ig 390..463 CDD:299845
Ig 471..561 CDD:299845
I-set 471..560 CDD:254352
I-set 618..709 CDD:254352
Ig 645..705 CDD:143165
DUF1136 715..741 CDD:284093
IG_like 762..843 CDD:214653
Ig 779..835 CDD:143165
I-set 890..982 CDD:254352
Ig 918..979 CDD:143165
DUF1136 988..1014 CDD:284093
I-set 1024..1116 CDD:254352
Ig 1058..1113 CDD:143165
I-set 1158..1250 CDD:254352
Ig 1178..1246 CDD:143165
DUF1136 1256..1282 CDD:284093
I-set 1291..1380 CDD:254352
IGc2 1304..1372 CDD:197706
DUF1136 1388..1414 CDD:284093
I-set 1424..1515 CDD:254352
Ig 1442..1513 CDD:143165
DUF1136 1522..1548 CDD:284093
I-set 1558..1645 CDD:254352
IGc2 1571..1639 CDD:197706
DUF1136 1655..1679 CDD:284093
I-set 1691..1782 CDD:254352
IGc2 1718..1772 CDD:197706
DUF1136 1788..1814 CDD:284093
I-set 1824..1916 CDD:254352
IGc2 1838..1906 CDD:197706
DUF1136 1922..1948 CDD:284093
I-set 1958..2049 CDD:254352
Ig 1985..2044 CDD:143165
I-set 2089..2181 CDD:254352
IGc2 2103..2171 CDD:197706
DUF1136 2187..2213 CDD:284093
I-set 2222..2314 CDD:254352
IGc2 2236..2304 CDD:197706
DUF1136 2320..2346 CDD:284093
I-set 2356..2448 CDD:254352
Ig 2384..2445 CDD:143165
DUF1136 2454..2480 CDD:284093
I-set 2488..2580 CDD:254352
Ig 2516..2576 CDD:143165
I-set 2622..2714 CDD:254352
IGc2 2636..2704 CDD:197706
I-set 2754..2844 CDD:254352
Ig 2771..2840 CDD:143165
IGc2 2908..2974 CDD:197706
I-set 3029..3120 CDD:254352
Ig 3057..3116 CDD:143165
I-set 3130..3220 CDD:254352
Ig 3148..3219 CDD:143165
I-set 3263..3354 CDD:254352
I-set 3401..3493 CDD:254352
Ig 3429..3490 CDD:143165
I-set 3539..3630 CDD:254352
Ig 3556..3625 CDD:143165
I-set 3676..3767 CDD:254352
IGc2 3690..3758 CDD:197706
I-set 3811..3900 CDD:254352
Ig 3828..3899 CDD:143165
I-set 3954..4046 CDD:254352
Ig 3963..4042 CDD:299845
I-set 4092..4180 CDD:254352
Ig 4102..4172 CDD:299845
I-set 4394..4483 CDD:254352
Ig 4411..4480 CDD:143165
I-set 4497..4581 CDD:254352
Ig 4519..4580 CDD:143165
I-set 4604..4693 CDD:254352
Ig 4621..4691 CDD:299845
I-set 4702..4792 CDD:254352
Ig 4702..4791 CDD:299845
COG4372 4996..>5260 CDD:226809
I-set 6536..6622 CDD:254352
Ig 6554..6622 CDD:143165
Ig 6654..6725 CDD:143165
I-set 6743..6829 CDD:254352
Ig 6760..6829 CDD:299845
I-set 6841..6928 CDD:254352
Ig 6858..6927 CDD:143165
I-set 6942..7033 CDD:254352
IGc2 6957..7023 CDD:197706
I-set 7066..7157 CDD:254352
Ig 7084..7153 CDD:143165
IGc2 7224..7289 CDD:197706
Ehrlichia_rpt 14571..15030 CDD:118064
SH3_p47phox_like 16753..16807 CDD:212790
I-set 16841..16931 CDD:254352
Ig 16858..16931 CDD:299845
I-set 16965..17060 CDD:254352
IGc2 16978..17050 CDD:197706
I-set 17068..17152 CDD:254352
Ig_2 17078..17152 CDD:290606
IG_like 17170..17253 CDD:214653
Ig 17180..17250 CDD:143165
I-set 17260..17342 CDD:254352 5/20 (25%)
IGc2 17274..17331 CDD:197706 3/8 (38%)
I-set 17347..17432 CDD:254352 16/92 (17%)
IGc2 17367..17423 CDD:197706 11/63 (17%)
I-set 17437..17521 CDD:254352 21/108 (19%)
Ig <17468..17521 CDD:299845 16/69 (23%)
I-set 17528..17611 CDD:254352 10/82 (12%)
Ig 17553..17602 CDD:143165 3/48 (6%)
I-set 17618..17708 CDD:254352 21/95 (22%)
Ig 17635..17708 CDD:299845 19/78 (24%)
FN3 17712..17791 CDD:238020 24/87 (28%)
I-set 17813..17898 CDD:254352 2/84 (2%)
Ig 17830..17894 CDD:143165 1/63 (2%)
Ig 17922..17994 CDD:299845 6/71 (8%)
FN3 17998..18090 CDD:238020 34/96 (35%)
FN3 18098..18189 CDD:238020 22/90 (24%)
FN3 18207..18298 CDD:238020 30/94 (32%)
FN3 18307..18398 CDD:238020 23/92 (25%)
myom1bXP_009301915.1 I-set 166..258 CDD:254352 22/109 (20%)
Ig 183..255 CDD:143165 17/81 (21%)
IG_like 305..388 CDD:214653 20/83 (24%)
IGc2 307..370 CDD:197706 16/63 (25%)
FN3 399..489 CDD:238020 27/89 (30%)
FN3 525..618 CDD:238020 34/96 (35%)
FN3 626..717 CDD:238020 23/93 (25%)
FN3 731..824 CDD:238020 29/92 (32%)
FN3 836..934 CDD:238020 26/98 (27%)
Ig 936..1020 CDD:299845
Ig 1185..1241 CDD:299845
Ig 1369..1460 CDD:299845
I-set 1376..1460 CDD:254352
CAF-1_p60_C 1517..1642 CDD:292150
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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