DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgm1 and cpsG

DIOPT Version :10

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_416552.1 Gene:cpsG / 946574 ECOCYCID:EG10162 Length:456 Species:Escherichia coli


Alignment Length:519 Identity:122/519 - (23%)
Similarity:185/519 - (35%) Gaps:139/519 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ENFVQAILEANGAALAGSTLVVGGDGRFYCKEAAELIVRLSAANGVSKLLVGQNGILSTPAVSSL 101
            |:....|..|.|..|...|:|:|||.|...:.....:.:.....||..|.:|.:|   |..:...
E. coli    22 EDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSG---TEEIYFA 83

  Fly   102 IRHNKALGGIVLTASHNPGGPENDF-GIKFNCENGGP-APDAFTNHIYKIT-----TEIKEYKLV 159
            ..|....|||.:||||||    .|: |:|...|...| :.|.....:.::.     ..:.|.|..
E. coli    84 TFHLGVDGGIEVTASHNP----MDYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRG 144

  Fly   160 RNLQIDISKVGVTSFDIAGKPFTVEVIDSVANYVRHMEEIFDFAKLKDFVSGKATGKPLKMRIDA 224
            |..||::...                      ||.|   :|.:..:|:..       |||:.|::
E. coli   145 RYQQINLRDA----------------------YVDH---LFGYINVKNLT-------PLKLVINS 177

  Fly   225 MNGVTGSYVR--EIFLNRLGA-TESSVVHTTPLPDFGGLHPDPNLTYAKDLVDT---VAQGDYDI 283
            .||..|..|.  |.....||| .|...||.||..:|....|:|.|...:|  ||   |.:...|:
E. coli   178 GNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRD--DTRNAVIKHGADM 240

  Fly   284 GAAFDGDGDRNMIIGSKAFFVTPSDSLAVIAHYLEAIPYFQKNGVQGFARSMPTASAVDLVGRKL 348
            |.|||||.||..:...|..|:   :...::....||  :.:||         |.|          
E. coli   241 GIAFDGDFDRCFLFDEKGQFI---EGYYIVGLLAEA--FLEKN---------PGA---------- 281

  Fly   349 GKEVFEVPTGWKYFGNLMDAGRLCLCGEESFGTGSNHIREKDGIWAVLAWISVMQHTGKG-IEDI 412
             |.:.:....|.....:..||          ||                  .||..||.. |::.
E. coli   282 -KIIHDPRLSWNTVDVVTAAG----------GT------------------PVMSKTGHAFIKER 317

  Fly   413 LKQHWSVYG-----RNYFTRYDYEECASDP---CNEMVATMEKTITAPEFVGKSYSSGGKTYKVK 469
            :::..::||     .:||..:.|.:....|   ..|:|...:||:      |:........:...
E. coli   318 MRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKDKTL------GELVRDRMAAFPAS 376

  Fly   470 EADNFSYTDPVDK-------------SVATKQGLRIVFEDGSRIVVRLSGTGSSGATVRLYIDS 520
            ...|.....||:.             :|....|:.:.|.|. |..:|.|.|   ...|||.::|
E. coli   377 GEINSKLAQPVEAINRVEQHFSREALAVDRTDGISMTFADW-RFNLRTSNT---EPVVRLNVES 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PGM1 6..560 CDD:100087 122/519 (24%)
cpsGNP_416552.1 PRK15414 1..456 CDD:185312 122/519 (24%)

Return to query results.
Submit another query.