DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm1 and pgm

DIOPT Version :10

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_415214.1 Gene:pgm / 945271 ECOCYCID:EG12144 Length:546 Species:Escherichia coli


Alignment Length:595 Identity:156/595 - (26%)
Similarity:241/595 - (40%) Gaps:127/595 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LTVEIVATKPYEGQ-----KPGTSGLRKKV--KVFTQPNYTENFVQAILEANGAALAGSTLVVGG 60
            ||.:....||..|.     |.||||.|...  ..|.:|:... ..|||.|............||.
E. coli    22 LTAQYYVLKPEAGNAEHAVKFGTSGHRGSAARHSFNEPHILA-IAQAIAEERAKNGITGPCYVGK 85

  Fly    61 DGRFYCKEAAELIVRLSAANGVSKLLVGQNGILSTPAVS-SLIRHNKALG----GIVLTASHNPG 120
            |.....:.|...::.:.|||||..::...||...||||| :::.|||..|    |||:|.|||| 
E. coli    86 DTHALSEPAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNP- 149

  Fly   121 GPENDFGIKFNCENGGPAPDAFTNHIYKITTEIKEYKLVRNLQIDISKVGVTSFDIAGKPFTVEV 185
             || |.|||:|..|||||.   ||     .|::.|.:....|...:..|...|.|.|.....|:.
E. coli   150 -PE-DGGIKYNPPNGGPAD---TN-----VTKVVEDRANALLADGLKGVKRISLDEAMASGHVKE 204

  Fly   186 IDSVANYVRHMEEIFDFAKLKDFVSGKATGKPLKMRIDAMNGVTGSYVREIFLNRLGATESSVVH 250
            .|.|..:|..:.:|.|.|.::     ||   .|.:.:|.:.|....|.:.|              
E. coli   205 QDLVQPFVEGLADIVDMAAIQ-----KA---GLTLGVDPLGGSGIEYWKRI-------------- 247

  Fly   251 TTPLPDFGGLHPDPNLTYAKDLVD---------------------------TVAQGDYDIGAAFD 288
                    |.:.:.|||...|.||                           ...:..:|:..|.|
E. coli   248 --------GEYYNLNLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLAFAND 304

  Fly   289 GDGDRNMIIGSKAFFVTPSDSLAVIAHYL-EAIPYFQKNGVQGFARSMPTASAVDLVGRKLGKEV 352
            .|.||:.|: :.|..:.|:..|||..:|| :..|.:.|:...|  :::.:::.:|.|...||:::
E. coli   305 PDYDRHGIV-TPAGLMNPNHYLAVAINYLFQHRPQWGKDVAVG--KTLVSSAMIDRVVNDLGRKL 366

  Fly   353 FEVPTGWKYFGNLMDAGRLCLCGEESFGT------GSNHIREKDGIWAVLAWISVMQHTGKGIED 411
            .|||.|:|:|.:.:..|.....||||.|.      |:....:||||...|....:...|||..: 
E. coli   367 VEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQ- 430

  Fly   412 ILKQHWSVYGRNYFTRYDYEECASDPCNEMVATMEKTITAPEFVGKSYSSGGKTYKVKEADNFSY 476
               :|::...:. |....|....:...:...|.:.|  .:||.|..|..:|              
E. coli   431 ---EHYNELAKR-FGAPSYNRLQAAATSAQKAALSK--LSPEMVSASTLAG-------------- 475

  Fly   477 TDPVDKSV-------ATKQGLRIVFEDGSRIVVRLSGTGSSGATVRLYIDSYEKENVLGQASVML 534
             ||:...:       |:..||:::.::| ....|.|||..:   .::|.:|:..|....|..   
E. coli   476 -DPITARLTAAPGNGASIGGLKVMTDNG-WFAARPSGTEDA---YKIYCESFLGEEHRKQIE--- 532

  Fly   535 KPLIDIALEI 544
            |..::|..|:
E. coli   533 KEAVEIVSEV 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PGM1 6..560 CDD:100087 154/592 (26%)
pgmNP_415214.1 pgm 2..544 CDD:273459 156/595 (26%)

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