DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgm1 and PGM

DIOPT Version :10

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_199995.1 Gene:PGM / 835257 AraportID:AT5G51820 Length:623 Species:Arabidopsis thaliana


Alignment Length:81 Identity:18/81 - (22%)
Similarity:27/81 - (33%) Gaps:30/81 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LPELIEGYESCISHFIEEGGEGDVLELKVQDPFHRLLLHGVCEYHN-------------LVSTTA 145
            |.||: |...|.|.  :.|..|:.            .||....|.|             ||:...
plant    44 LQELL-GSNQCYSS--QRGASGET------------ALHVAAGYDNLRAAETLLTADPSLVNVPM 93

  Fly   146 TEQI--GRIAMKTTSI 159
            |.|:  |:.|:...::
plant    94 TSQLYQGQTALHIAAV 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PGM1 6..560 CDD:100087 18/81 (22%)
PGMNP_199995.1 PLN02307 63..623 CDD:177942 10/59 (17%)

Return to query results.
Submit another query.