DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm1 and Pgm2

DIOPT Version :9

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_079976.1 Gene:Pgm2 / 66681 MGIID:97564 Length:620 Species:Mus musculus


Alignment Length:564 Identity:127/564 - (22%)
Similarity:197/564 - (34%) Gaps:134/564 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GTSGLR-------KKVKVFTQPNYTENFVQAI------LEANGAAL---AGSTLVVGGDGRFYCK 67
            ||:|||       .::...|....|:.|.:.:      |:..|..:   |.:....||..|.:.:
Mouse    66 GTAGLRAPMGAGISRMNDLTIIQTTQGFCRYLEKQFSDLKQRGVVISFDARAHPASGGSSRRFAR 130

  Fly    68 EAAELIVRLSAANGVSKLLVGQNGILSTPAVSSLIRHNKALGGIVLTASHNPGGPENDFGIKFNC 132
            .||...:    ..||...|.  :.|..||.|...:.|.|...||::|||||   |:.|.|.|...
Mouse   131 LAATAFI----TQGVPVYLF--SDITPTPFVPYTVSHLKLCAGIMITASHN---PKQDNGYKVYW 186

  Fly   133 ENGGPAPDAFTNHIYKITTEIKEYKLVRNLQ----------IDISKVGVTSFDIAGKPFTVEVID 187
            :||.   ...:.|...|:..|:|     ||:          :|.|            |.......
Mouse   187 DNGA---QIISPHDRGISQAIEE-----NLEPWPQAWEESLVDSS------------PLLHNPSA 231

  Fly   188 SVAN-YVRHMEEIFDFAKLKDFVSGKATGKPLKMRI--DAMNGVTGSYVREIF-LNRLGATESSV 248
            |:.| |         |..||.:...:...|..|::.  .:::||...:|:..| ...|...|:..
Mouse   232 SIGNDY---------FEDLKKYCFHRTVNKESKVKFVHTSVHGVGHEFVQLAFKAFDLAPPEAVP 287

  Fly   249 VHTTPLPDFGGL-HPDPN-----LTYAKDLVDTVAQGDYDIGAAFDGDGDRNMII---GSKAFFV 304
            ....|.|:|..: :|:|.     ||.:..|.|.:..   .|..|.|.|.||..:.   .|..:.|
Mouse   288 QQKDPDPEFPTVKYPNPEEGKGVLTLSFALADKIKA---KIVLANDPDADRLAVAEKQDSGEWRV 349

  Fly   305 TPSDSLAVIAHYLEAIPYFQKNGVQG------FARSMPTASAVDLVGRKLGKEVFEVPTGWKYFG 363
            ...:.|..:..:.....:.:||..|.      ...|..::..:..:..|.|....|..||:|:.|
Mouse   350 FSGNELGALLGWWLFTSWKEKNQDQSNLKDTYMLSSTVSSKILRAIALKEGFHFEETLTGFKWMG 414

  Fly   364 N----LMDAGRLCLCG-EESFG-TGSNHIREKDGIWAVL---AWISVMQHTGKGIEDILKQHWSV 419
            |    |.|.|:..|.. ||:.| .....:.:|||:.|.:   ...|.:......:...|...:..
Mouse   415 NRAQQLGDQGKTVLFAFEEAIGYMCCPFVLDKDGVSAAVICAELASFLATKNLSLSQQLNAIYVE 479

  Fly   420 YG-----RNYFTRYDYEECASDPCNEMVATMEKTITAPEFVGKSYSSGGKTYKVKEADNF----- 474
            ||     .:||..:|..                  |.....|...:..||....|....|     
Mouse   480 YGYHITTASYFICHDQG------------------TIQNLFGNLRNYDGKNNYPKMCGKFEISAI 526

  Fly   475 -----SYTD--PVDKSV----ATKQGLRIVFEDGSRIVVRLSGT 507
                 .|.|  |..|:|    .:.|.:...|.:|....:|.|||
Mouse   527 RDLTTGYDDSQPDKKAVLPTSKSSQMITFTFANGGVATMRTSGT 570

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PLN02307 1..560 CDD:177942 127/564 (23%)
PGM1 6..560 CDD:100087 127/564 (23%)
Pgm2NP_079976.1 PTZ00150 19..620 CDD:240294 127/564 (23%)