DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgm1 and PRTFDC1

DIOPT Version :10

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_064585.1 Gene:PRTFDC1 / 56952 HGNCID:23333 Length:225 Species:Homo sapiens


Alignment Length:148 Identity:28/148 - (18%)
Similarity:58/148 - (39%) Gaps:34/148 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 KLVRNLQIDI--SKVGVTSFDIAGKPFTVEVIDSVANYVRHMEEI----FDFAKLKDFVSGKATG 215
            :|.:::..||  |.:.|......|..|..::::.:.|..|:.:..    .||.:||.:.:.::.|
Human    55 RLAKDIMKDIGYSDIMVLCVLKGGYKFCADLVEHLKNISRNSDRFVSMKVDFIRLKSYRNDQSMG 119

  Fly   216 KPLKMRIDAMNGVTGSYV------------REIFLNRLGATESSVVHTTPL------------PD 256
            :...:..|.::.:.|..|            .:..|:.:...:.:::....|            ||
Human   120 EMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSRSDGFRPD 184

  Fly   257 FGGLHPDPNL---TYAKD 271
            :.|.. .|||   .||.|
Human   185 YAGFE-IPNLFVVGYALD 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PGM1 6..560 CDD:100087 28/148 (19%)
PRTFDC1NP_064585.1 PRTases_typeI 7..224 CDD:444823 28/148 (19%)

Return to query results.
Submit another query.