DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm1 and pgm2l1

DIOPT Version :9

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001091955.1 Gene:pgm2l1 / 449945 ZFINID:ZDB-GENE-041008-205 Length:619 Species:Danio rerio


Alignment Length:571 Identity:128/571 - (22%)
Similarity:202/571 - (35%) Gaps:148/571 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GTSGLR-------KKVKVFTQPNYTENFVQAI------LEANGAALAGSTLVVGGDGRFYCKE-- 68
            ||:|||       .::...|....|:...:.:      |:..|       ||||.|.|.....  
Zfish    65 GTAGLRAAMGAGFARINDLTIIQSTQGLYKYLAKCFPDLKTRG-------LVVGYDTRAQASSGC 122

  Fly    69 AAELIVRLSAA----NGVSKLLVGQNGILSTPAVSSLIRHNKALGGIVLTASHNPGGPENDFGIK 129
            .:|.:.:|:||    ..|...|.  :..:.||.|...:....|..|:::|||||   .:.|.|.|
Zfish   123 TSERLAKLTAAVMLCKDVPVYLF--STYVPTPFVPYAVMKYGAAAGVMITASHN---RKEDNGYK 182

  Fly   130 FNCENGGPAPDAFTNHIYKITTEIKE-------YKLVRN--LQIDISKVGVTSFDIAGKPFTVEV 185
            ....||..........|.....|..|       ..||.|  |:.|                   .
Zfish   183 VYWHNGAQIASPHDKEILHCIEESAEPWAESWNEDLVENSLLKRD-------------------P 228

  Fly   186 IDSVANYVRHMEEIFDFAKLKDFVSGKATGKPLKMRIDAMNGVTGSYVREIFLNRLGATESSVV- 249
            ::.|.::  :|||:......:: ::.|:   |||....:.:||..:||:..| .:.|......| 
Zfish   229 LEDVCHW--YMEELNTLCFHRE-LNAKS---PLKFVHSSFHGVGHNYVQRAF-QQFGFPPPIPVP 286

  Fly   250 -HTTPLPDFGGL---HPDPNLTYAKDLVDTVAQGDYDIGAAFDGDGDR------NMIIGSKAFFV 304
             ...|.|||..:   :|:...:..:..:....:....|..|.|.|.||      |...|.|.|  
Zfish   287 EQKDPDPDFSTVSCPNPEEGESVLELSLRLAEREKARIVVATDPDADRLAVAEQNDNCGWKVF-- 349

  Fly   305 TPSDSLAVIAHYL-----EAIP--------YFQKNGVQGFARSMPTASAVDLVGRKLGKEVFEVP 356
            |.::..|::..::     ||.|        |.....|        ::..::...|..|....|..
Zfish   350 TGNELAALLGWWMLFNWKEAHPDPADTERVYMLATTV--------SSKILEAFARIEGFHFEETL 406

  Fly   357 TGWKYFGN----LMDAGR-LCLCGEESFG-TGSNHIREKDGI--WAVLAWISVMQHT-GKGIEDI 412
            .|:|:.||    |..||: :....|||.| ...|.:.:|||:  .||:|.::...|| ...:...
Zfish   407 PGFKWIGNRIHELKKAGKEVIFSFEESIGFLCGNMVLDKDGVSTAAVVAEMASYLHTKNLSLNQQ 471

  Fly   413 LKQHWSVYGRNYFTRYDYEECASDP---------------------CNEMVATMEKTITAPEFVG 456
            |...:.:|| .:.:|..|..|...|                     |.:...|..:.:|.     
Zfish   472 LCNIYEIYG-YHISRTSYVLCNDPPTIHRIFSRLRNFGGQGVYPTSCGDYCITHIRDVTT----- 530

  Fly   457 KSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRIVFEDGSRIVVRLSGT 507
             .|.|.....|.        ..|:.||   .|.|...|::|....:|.|||
Zfish   531 -GYDSSQPDKKC--------VLPLSKS---SQMLTFTFQNGIVATLRTSGT 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PLN02307 1..560 CDD:177942 128/571 (22%)
PGM1 6..560 CDD:100087 128/571 (22%)
pgm2l1NP_001091955.1 PTZ00150 22..618 CDD:240294 128/571 (22%)
PGM2 61..600 CDD:100092 128/571 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574568
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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