DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm1 and pgm1

DIOPT Version :10

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_957319.1 Gene:pgm1 / 394000 ZFINID:ZDB-GENE-040426-1245 Length:561 Species:Danio rerio


Alignment Length:561 Identity:322/561 - (57%)
Similarity:427/561 - (76%) Gaps:8/561 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VEIVATKPYEGQKPGTSGLRKKVKVFTQ-PNYTENFVQAILE-ANGAALAGSTLVVGGDGRFYCK 67
            :.::.||||..||||||||||:|.||.| .:|.|||:|:|:. .:.|......|||||||||:.|
Zfish     4 ITVIKTKPYTDQKPGTSGLRKRVTVFQQNQHYAENFIQSIISTVDPAQRQEGALVVGGDGRFFMK 68

  Fly    68 EAAELIVRLSAANGVSKLLVGQNGILSTPAVSSLIRHNKALGGIVLTASHNPGGPENDFGIKFNC 132
            :|.:||::::||||:.:|::||:||:||||||.:||..||:|||:||||||||||..|||||||.
Zfish    69 DAIQLIIQIAAANGIGRLVIGQDGIMSTPAVSCVIRKIKAIGGIILTASHNPGGPNGDFGIKFNI 133

  Fly   133 ENGGPAPDAFTNHIYKITTEIKEYKLVRNLQIDISKVGVTSFDI-AGKPFTVEVIDSVANYVRHM 196
            .:|||||:..|:.|::|:..::||.:...|::|:|.:|..:|:: ..||||||::|||.:|...:
Zfish   134 SSGGPAPEGITDKIFQISKSLQEYHICPELKVDLSTIGKQTFEVDTFKPFTVEIVDSVESYAEML 198

  Fly   197 EEIFDFAKLKDFVSGKATGKPLKMRIDAMNGVTGSYVREIFLNRLGATESSVVHTTPLPDFGGLH 261
            .:|||||.||:.:||.   ..:.:|:|||:||.|.||::|....||:..:|.|:..|..||||.|
Zfish   199 RDIFDFAALKELLSGP---NHINVRLDAMHGVVGPYVKKIVCEELGSPANSAVNCVPSEDFGGHH 260

  Fly   262 PDPNLTYAKDLVDTVAQGDYDIGAAFDGDGDRNMIIGSKAFFVTPSDSLAVIAHYLEAIPYFQKN 326
            ||||||||.|||:|:..|:||.||||||||||||::|....||.||||:|||...:.:||||||.
Zfish   261 PDPNLTYAADLVNTMKGGEYDFGAAFDGDGDRNMVLGKHGSFVNPSDSVAVIGANITSIPYFQKT 325

  Fly   327 GVQGFARSMPTASAVDLVGRKLGKEVFEVPTGWKYFGNLMDAGRLCLCGEESFGTGSNHIREKDG 391
            ||:|.||||||:.|:|.|.:.|...::|.|||||:||||||||:|.|||||||||||:|||||||
Zfish   326 GVKGLARSMPTSGALDNVAKALKMPLYETPTGWKFFGNLMDAGKLSLCGEESFGTGSDHIREKDG 390

  Fly   392 IWAVLAWISVMQHTGKGIEDILKQHWSVYGRNYFTRYDYEECASDPCNEMVATMEKTITAPEFVG 456
            :||||||:|::....:.:|||:|.||..:|||:||||||||..||..|:|:..::.|:....|||
Zfish   391 LWAVLAWLSILATRKQSVEDIMKDHWQKFGRNFFTRYDYEEVDSDAANKMIDHLQTTMFDKAFVG 455

  Fly   457 KSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRIVFEDGSRIVVRLSGTGSSGATVRLYIDSY 521
            ::::||.|||:|::||||.||||||.||:..|||||:|.|||||:.|||||||:|||:|||||||
Zfish   456 QTFTSGDKTYQVEKADNFEYTDPVDGSVSKGQGLRIIFSDGSRIIFRLSGTGSAGATIRLYIDSY 520

  Fly   522 EK--ENVLGQASVMLKPLIDIALEISQLPKFTGRNAPTVIT 560
            ||  :.:.....|||.||:||||:||||.:.|||.||||||
Zfish   521 EKDPQKIYQDPQVMLAPLVDIALKISQLQEKTGRAAPTVIT 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PGM1 6..560 CDD:100087 320/558 (57%)
pgm1NP_957319.1 PGM1 5..561 CDD:100087 320/558 (57%)

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