DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm1 and Pgm2a

DIOPT Version :9

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_610453.1 Gene:Pgm2a / 35923 FlyBaseID:FBgn0033377 Length:623 Species:Drosophila melanogaster


Alignment Length:550 Identity:129/550 - (23%)
Similarity:208/550 - (37%) Gaps:103/550 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GTSGLRKKVKVFTQPNYTENFVQAILEANG------------AALAGSTLVVGGDGRFYCKEAAE 71
            ||:|||..::....   :.|.:..|..|.|            |..:|..:|.|.|||:.....||
  Fly    66 GTAGLRACMRAGFD---SMNELVVIQTAQGLCEYIKEQYPDPADWSGRGIVFGYDGRYNSHRFAE 127

  Fly    72 LIVRLSAANGVSKLLVGQNGILSTPAVSSLIRHNKALGGIVLTASHNPGGPENDFGIKFNCENGG 136
            |...:...|.....|..:  .::||.|...|...:.|.|:::|||||   |:.|.|.|....||.
  Fly   128 LSAIVFLNNDFKVWLFKR--YVATPMVPFAILRLQCLAGVMVTASHN---PKEDNGYKVYWTNGA 187

  Fly   137 ---PAPD-----AFTNHIYKITTEIKEYKLVRNLQIDISKVGVTSFDIAGKPFTVEVIDSVANYV 193
               |..|     :..|::....:...:..:..|..::      ..:||...|:            
  Fly   188 QIIPPHDEGIQESILNNLEPKGSSWDDSAMCSNTMLE------DPYDIVVPPY------------ 234

  Fly   194 RHMEEIFDFAKLK-DFVSGKATGK-PLKMRIDAMNGVTGSYVREIFLN-RLGATESSVVHTTPLP 255
                  ||..|.: ...|.:|.|: .|.....||:||..::|::.|.. .|....|......|.|
  Fly   235 ------FDILKKQLPCTSLEANGRCSLSFTYTAMHGVGYAFVKQAFARINLKPFISVCEQQEPDP 293

  Fly   256 DFGGLHPDPNLTYAKDLVD----TVAQGDYDIGAAFDGDGDRNMII-----GSKAFFVTPSDSLA 311
            :| ...|.||....|..:|    |.......|..|.|.|.||..:.     ||...| :.::..|
  Fly   294 EF-PTTPMPNPEEGKTSLDLSIKTAKANSSQIILANDPDADRLAVAEVREDGSYKLF-SGNEVGA 356

  Fly   312 VIA------HYLEAIPYFQKNGVQGFARSMPTASAVDLVGRKLGKEVFEVPTGWKYFGN----LM 366
            ::.      |.:........|.|  ...|..::..:..:..:.|.:.||..||:|:.||    |.
  Fly   357 LLGWWSLELHKMREPDCDVSNCV--MIASTVSSKILRAMAEREGFQFFETLTGFKWMGNKAIELQ 419

  Fly   367 DAGRLCLCG-EESFG--TGSNHIREKDGIWAV--LAWISVMQHTG--KGIEDILKQHWSVYGRNY 424
            .||:..|.. ||:.|  .|:. :.:|||:.|.  ||.::......  ..:::.|:..:..|| .:
  Fly   420 QAGKTVLFAFEEAIGFMVGTT-VLDKDGVSAAGHLATMACYLRCKLCMTLQEKLRDIYETYG-FH 482

  Fly   425 FTRYDYEECASDPCNEMVATMEKTITAPEFVGKSYSSG--GKTYKVKEADNFSYTDPVDKSVATK 487
            .|...|..|...|..|.:  .|:..|..|....:|.:.  ...|:::...:.  |...|.|...|
  Fly   483 TTVSSYVICRCPPVIEQI--FERLRTWDEGKADTYPTSILNGEYEIENVRDL--TTGFDSSTGDK 543

  Fly   488 ----------QGLRIVFEDGSRIVVRLSGT 507
                      |.:...|::|..:.:|.|||
  Fly   544 KATLPTSSSSQMITFTFKNGLVVTLRTSGT 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PLN02307 1..560 CDD:177942 128/549 (23%)
PGM1 6..560 CDD:100087 128/549 (23%)
Pgm2aNP_610453.1 PTZ00150 23..623 CDD:240294 128/549 (23%)
PGM2 62..604 CDD:100092 128/549 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439080
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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