DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgm1 and HPRT1

DIOPT Version :9

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_000185.1 Gene:HPRT1 / 3251 HGNCID:5157 Length:218 Species:Homo sapiens


Alignment Length:125 Identity:30/125 - (24%)
Similarity:50/125 - (40%) Gaps:32/125 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 GKPFTVEVIDSV----ANYVRHMEEIFDFAKLKDFVSGKATGKPLKMRIDAMNGVTG-------- 230
            |..|..:::|.:    .|..|.:....||.:||.:.:.::||....:..|.::.:||        
Human    71 GYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVED 135

  Fly   231 ------------SYVREIFLNRLGATESSVVHTTP-----LPDFGGLH-PDPNLT-YAKD 271
                        |.||: :..::....|.:|..||     .|||.|.. ||..:. ||.|
Human   136 IIDTGKTMQTLLSLVRQ-YNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALD 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PLN02307 1..560 CDD:177942 30/125 (24%)
PGM1 6..560 CDD:100087 30/125 (24%)
HPRT1NP_000185.1 PRTases_typeI 8..218 CDD:412297 30/125 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141580
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.