DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm1 and PGM2L1

DIOPT Version :9

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_011543255.1 Gene:PGM2L1 / 283209 HGNCID:20898 Length:643 Species:Homo sapiens


Alignment Length:628 Identity:134/628 - (21%)
Similarity:216/628 - (34%) Gaps:173/628 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GTSGLRKK-------VKVFTQPNYTENFVQAILEANGAALAGSTLVVGGD--GRFYCKEAAELIV 74
            ||:|||..       :...|....|:...: .||...:.......|||.|  |:.....:::.:.
Human    89 GTAGLRSAMGAGFCYINDLTVIQSTQGMYK-YLERCFSDFKQRGFVVGYDTRGQVTSSCSSQRLA 152

  Fly    75 RLSAANGVSKLLVGQ-------NGILSTPAVSSLIRHNKALGGIVLTASHNPGGPENDFGIKFNC 132
            :|:||     :|:.:       :..:.||.|...::..||:.|:::|||||   .:.|.|.|...
Human   153 KLTAA-----VLLAKDVPVYLFSRYVPTPFVPYAVQKLKAVAGVMITASHN---RKEDNGYKVYW 209

  Fly   133 ENGGPAPDAFTNHIYKITTEIKE---------------------YKLVRNLQIDISKVGV----- 171
            |.|..........|.|...|..|                     ..:.|....|:.|:..     
Human   210 ETGAQITSPHDKEILKCIEECVEPWNGSWNDNLVDTSPLKRDPLQDICRRYMEDLKKICFYRELN 274

  Fly   172 ---------TSFDIAGKPFTVEVIDSVANYVRHMEEIFDFAKLKDFVSGKATGKPLKMRIDAMNG 227
                     |||...|.           :||:...::|.| |....|..:....|....:...|.
Human   275 SKTTLKFVHTSFHGVGH-----------DYVQLAFKVFGF-KPPIPVPEQKDPDPDFSTVKCPNP 327

  Fly   228 VTGSYVREIFLNRLGATESS-VVHTTPLPDFGGLHPDPNLTYAKDLVDT----VAQGDYDIGAAF 287
            ..|..|.|:.| ||...|:: ||..|        .||.:...|.:|.:.    |..|: ::.|.|
Human   328 EEGESVLELSL-RLAEKENARVVLAT--------DPDADRLAAAELQENGCWKVFTGN-ELAALF 382

  Fly   288 --------DGDGDRNMIIGSKAFFVTPSDS--LAVIA-----HYLEAIPYFQKNGVQGFARSMPT 337
                    ..:..||..:.:.....|...|  |..||     |:.|.:|.|:..|          
Human   383 GWWMFDCWKKNKSRNADVKNVYMLATTVSSKILKAIALKEGFHFEETLPGFKWIG---------- 437

  Fly   338 ASAVDLVGRKLGKEV---FEVPTGWKYFGNLMDAGRLCLCGEESFGTGSNHIREKDGIWAVL--- 396
            :..:||:  :.||||   ||...|:             |||        ..:.:|||:.|.:   
Human   438 SRIIDLL--ENGKEVLFAFEESIGF-------------LCG--------TSVLDKDGVSAAVVVA 479

  Fly   397 ---AWISVMQHTGKGIEDILKQH----WSVYGRNYFTRYDYEECASDPCNEMVATMEKTITAPEF 454
               :::..|..|       |||.    :..|| .:.::..|..|...|..:.:....:...:|  
Human   480 EMASYLETMNIT-------LKQQLVKVYEKYG-YHISKTSYFLCYEPPTIKSIFERLRNFDSP-- 534

  Fly   455 VGKSYSSGGKTYKVKE----ADNFSYTDPVDKSV----ATKQGLRIVFEDGSRIVVRLSGTGSSG 511
              |.|.....|:.:..    ...:..:.|..|||    ...|.:...|::|....:|.|||... 
Human   535 --KEYPKFCGTFAILHVRDVTTGYDSSQPNKKSVLPVSKNSQMITFTFQNGCVATLRTSGTEPK- 596

  Fly   512 ATVRLYIDSYEKENVLGQASV--MLKPLIDIALEISQLPKFTG 552
              ::.|.:.....:....|.:  .||.|||..:|....|...|
Human   597 --IKYYAEMCASPDQSDTALLEEELKKLIDALIENFLQPSKNG 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PLN02307 1..560 CDD:177942 134/628 (21%)
PGM1 6..560 CDD:100087 134/628 (21%)
PGM2L1XP_011543255.1 PTZ00150 24..642 CDD:240294 134/628 (21%)
PGM2 85..628 CDD:100092 131/617 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141582
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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