DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm1 and prtfdc1a

DIOPT Version :9

Sequence 1:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_002666638.2 Gene:prtfdc1a / 100334391 ZFINID:ZDB-GENE-120727-16 Length:225 Species:Danio rerio


Alignment Length:190 Identity:34/190 - (17%)
Similarity:68/190 - (35%) Gaps:67/190 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 ILKQHWSVYGR---NYFTRYDYE-ECASDP----------------------------------- 437
            ::|..|:.|..   ||...|..: ||...|                                   
Zfish    16 VIKDGWTGYSLELFNYPEHYKGDLECVYIPHGVIMNRIECLARDILEDIGHHDMMVLCVLKGGYK 80

  Fly   438 -CNEMV--------ATMEKTITAPEFVG-KSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRI 492
             |:::|        :|..:..|..||:. |||.:...|      ::.....|.|.|:.  :|..:
Zfish    81 FCSDLVESIKAQSRSTNSRLTTRVEFIRFKSYLNDQST------EDLHIIGPDDLSML--KGKNV 137

  Fly   493 VFEDGSRIVVRLSGTGSSGATVRLYIDSYEKENVLGQASVMLKPLIDIALEISQLPKFTG 552
            :      ||..:..||.:...:..::::::.: ::..|.:::|.:...|.|   ||.:.|
Zfish   138 L------IVEAIVDTGKTMRALLQHVETFQPK-MVKVAGLLVKRVPHGAAE---LPDYVG 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm1NP_524675.1 PLN02307 1..560 CDD:177942 34/190 (18%)
PGM1 6..560 CDD:100087 34/190 (18%)
prtfdc1aXP_002666638.2 PRTases_typeI 10..224 CDD:294217 34/190 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574565
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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