DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fad2 and AT1G06360

DIOPT Version :9

Sequence 1:NP_651966.2 Gene:Fad2 / 44006 FlyBaseID:FBgn0029172 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001320561.1 Gene:AT1G06360 / 837147 AraportID:AT1G06360 Length:315 Species:Arabidopsis thaliana


Alignment Length:325 Identity:87/325 - (26%)
Similarity:143/325 - (44%) Gaps:51/325 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LSNRKTT-----------DGSK--------------LELVWVNIV--LFVI-LHISSLYGVWLLF 64
            ::.||||           |||.              .|..|.:|:  |.|| :|...|...:   
plant     6 ITQRKTTPQRSMCDPIREDGSNKRGAVSKEKRPYIHREWSWADIIRALTVINVHFLCLLAPF--- 67

  Fly    65 TSATWTTVVLFWPTVVVTILGVSGGAHRLWAHRTFKANTPLKLIFLFLNTLAFQDAVYYWARDHR 129
             :..|..:...:....:|.|.::...||..|||:||....|:....:....|.|.....|...||
plant    68 -NYKWEALRFGFVLYALTSLSITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHR 131

  Fly   130 VHHKYTETDADPYNSQRGWFFAHIGWLCCRKHPEVVEKGKQIDLSDLEADPLIMFQKKYYLLLMP 194
            .||::|::|.||::...|::|:|:.|:|..::.: .:.|.:.::.||:.      |..|:.|.|.
plant   132 FHHQFTDSDRDPHSPIEGFWFSHVWWICDTRYIK-YKCGGRNNVMDLKQ------QWFYWFLRMT 189

  Fly   195 IICFVLPTVLPMYLWG--ESLNVSWHVMALLRWCLSLNLIWTVNSSAHMHGMRPYDKNICPVDQG 257
            |...||.....:||:|  ..|.....|..::.:    ::.|.|||:.|:.|.|.:.......:..
plant   190 IGFHVLMFWTVLYLYGGLPYLTCGGGVGGVIGY----HVTWLVNSACHIWGSRSWKTKDTSRNVW 250

  Fly   258 FLIFFRVGEGYHNYHHVFPWDYKSAELGK--YSQDVTTKFIEFMAYLGWAYDLKSVSLDLVKQRV 320
            :|..|.:||.:||.||.|.   .||..|.  :..|:|...|.....||.|.|:|..| ::.||::
plant   251 WLSLFTMGESWHNNHHAFE---SSARQGLEWWQIDITWYLIRLFEVLGLATDVKLPS-EIQKQKL 311

  Fly   321  320
            plant   312  311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fad2NP_651966.2 Delta9-FADS-like 68..309 CDD:239582 68/244 (28%)
AT1G06360NP_001320561.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 124 1.000 Domainoid score I1803
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1806
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D971318at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1155
orthoMCL 1 0.900 - - OOG6_100468
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.740

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