DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fad2 and ADS4

DIOPT Version :9

Sequence 1:NP_651966.2 Gene:Fad2 / 44006 FlyBaseID:FBgn0029172 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_172124.2 Gene:ADS4 / 837146 AraportID:AT1G06350 Length:300 Species:Arabidopsis thaliana


Alignment Length:294 Identity:79/294 - (26%)
Similarity:132/294 - (44%) Gaps:41/294 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LELVWVNIVLFVILHISSLYGVWLLFTSATWTTVVLFWPTVVVTILGVSGGAHRLWAHRTFKANT 103
            :::|..::|  ||:|...|...:.....|....:|||    .:|.|.::...||..:||:||...
plant    32 VDVVRASVV--VIVHFLCLLAPFNFKWEALRFGLVLF----ALTTLSITFSFHRNLSHRSFKIPK 90

  Fly   104 PLKLIFLFLNTLAFQDAVYYWARDHRVHHKYTETDADPYNSQRGWFFAHIGWLCCRKHPEVVEKG 168
            .|:..:.:....|.|.....|...||.||::|::|.||::.:.|..|:||.|:...::.: .:.|
plant    91 WLEYPWAYSAVFALQGDPMDWVSIHRFHHQFTDSDRDPHSPKEGLLFSHILWIFDTQYIK-YKCG 154

  Fly   169 KQIDLSDLEADPLIMFQKKYYLLLMPIICFVLPTVLPMYLW----------GESLNVSWHVMALL 223
            .:.::.||:.      |..|..|...|...:|.....:||:          |..:.:.:||    
plant   155 GRDNVLDLKK------QWFYKFLRRTIAVHILMFWTILYLYGGLPYLTCGGGVGIFIGYHV---- 209

  Fly   224 RWCLSLNLIWTVNSSAHMHGMRPYDKNICPVDQGFLIFFRVGEGYHNYHHVFPWDYKSAELGK-- 286
                    .|.|||:.|:.|.|.::......:..:|..|.:||.:||.||.|.   .||..|.  
plant   210 --------TWLVNSACHIWGSRSWNTKDTSRNVWWLSLFTMGESWHNNHHAFE---SSARQGLEW 263

  Fly   287 YSQDVTTKFIEFMAYLGWAYDLKSVSLDLVKQRV 320
            :..|:|...|.....||.|.|:|..| :|.||::
plant   264 WQIDITWYLIRLFEVLGIATDVKLPS-ELQKQKM 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fad2NP_651966.2 Delta9-FADS-like 68..309 CDD:239582 67/252 (27%)
ADS4NP_172124.2 PLN02220 1..300 CDD:177866 79/294 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 124 1.000 Domainoid score I1803
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1806
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D971318at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1155
orthoMCL 1 0.900 - - OOG6_100468
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.740

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