DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fad2 and AT1G06120

DIOPT Version :9

Sequence 1:NP_651966.2 Gene:Fad2 / 44006 FlyBaseID:FBgn0029172 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_172102.1 Gene:AT1G06120 / 837121 AraportID:AT1G06120 Length:299 Species:Arabidopsis thaliana


Alignment Length:278 Identity:78/278 - (28%)
Similarity:131/278 - (47%) Gaps:23/278 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ILHISSLYGVWLLFTSA----TWTTVVLFWPTVVVTILGVSGGAHRLWAHRTFKANTPLKLIFLF 111
            ::.:|::..|.||...|    ||..........:.|.|.::...||...||:||....|:..|.:
plant    33 VMRVSAVGAVHLLCLLAPFNYTWEAFRFAAMVGISTNLSITFSYHRNLTHRSFKLPKWLEYPFAY 97

  Fly   112 LNTLAFQDAVYYWARDHRVHHKYTETDADPYNSQRGWFFAHIGWLCCRKHPEVVEK-GKQIDLSD 175
            ....|.|.....|...||.||::|::|.||::...|::|:|:.|:....:  :.|| |.:.::.|
plant    98 SALFALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSY--IREKCGGRDNVMD 160

  Fly   176 LEADPLIMFQKKYYLLLMPII-CFVLPTVLPMYLWGESLNVSWHVMALLRWCLSLNLIWTVNSSA 239
            |:       |:.:|..|...| ..:|...:.:||||....::|.|.  :...:..:..|.:||:.
plant   161 LK-------QQWFYRFLQNTIGLHILTFWILVYLWGGLPYLTWSVG--VGGAIGYHATWLINSAC 216

  Fly   240 HMHGMRPYDKNICPVDQGFLIFFRVGEGYHNYHHVFPWDYKSAELGK--YSQDVTTKFIEFMAYL 302
            |:.|.|.::......:..:|..|.:||.:||.||.|.   .||..|.  |..|:|...|.|...|
plant   217 HIWGSRAWNTKDTSRNIWWLGPFTMGESWHNNHHAFE---ASARHGLEWYQVDLTWYLIWFFQVL 278

  Fly   303 GWAYDLKSVSLDLVKQRV 320
            |.|.|:| :..|..|:::
plant   279 GLATDVK-LPTDAQKRKM 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fad2NP_651966.2 Delta9-FADS-like 68..309 CDD:239582 70/244 (29%)
AT1G06120NP_172102.1 PLN02220 1..299 CDD:177866 78/278 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 124 1.000 Domainoid score I1803
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1806
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D971318at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1155
orthoMCL 1 0.900 - - OOG6_100468
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X207
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.740

Return to query results.
Submit another query.