DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fad2 and Scd2

DIOPT Version :9

Sequence 1:NP_651966.2 Gene:Fad2 / 44006 FlyBaseID:FBgn0029172 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_033154.2 Gene:Scd2 / 20250 MGIID:98240 Length:358 Species:Mus musculus


Alignment Length:295 Identity:153/295 - (51%)
Similarity:210/295 - (71%) Gaps:12/295 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KLELVWVNIVLFVILHISSLYGVWLLFTSATWTTV--VLFWPTVVVTILGVSGGAHRLWAHRTFK 100
            |||.||.||:|..:||:.:|||:.|:.:...:|.:  .|::   |::.||::.||||||:|||:|
Mouse    67 KLEYVWRNIILMALLHLGALYGITLVPSCKLYTCLFAYLYY---VISALGITAGAHRLWSHRTYK 128

  Fly   101 ANTPLKLIFLFLNTLAFQDAVYYWARDHRVHHKYTETDADPYNSQRGWFFAHIGWLCCRKHPEVV 165
            |..||:|..:..||:|||:.||.||||||.|||::||.|||:||:||:||:|:|||..||||.|.
Mouse   129 ARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVK 193

  Fly   166 EKGKQIDLSDLEADPLIMFQKKYY---LLLMPIICFVLPTVLPMYLWGESLNVSWHVMALLRWCL 227
            |||.::|:|||:|:.|:|||::||   ||||   ||||||::|.|.|||:...|..|...||:.:
Mouse   194 EKGGKLDMSDLKAEKLVMFQRRYYKPGLLLM---CFVLPTLVPWYCWGETFVNSLCVSTFLRYAV 255

  Fly   228 SLNLIWTVNSSAHMHGMRPYDKNICPVDQGFLIFFRVGEGYHNYHHVFPWDYKSAELGKYSQDVT 292
            .||..|.|||:||::|.|||||||...:...:....||||:|||||.||:||.::|. ::..:.|
Mouse   256 VLNATWLVNSAAHLYGYRPYDKNISSRENILVSMGAVGEGFHNYHHAFPYDYSASEY-RWHINFT 319

  Fly   293 TKFIEFMAYLGWAYDLKSVSLDLVKQRVQRSGDGS 327
            |.||:.||.||.|||.|.||...|..|::|:||||
Mouse   320 TFFIDCMALLGLAYDRKRVSRAAVLARIKRTGDGS 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fad2NP_651966.2 Delta9-FADS-like 68..309 CDD:239582 129/245 (53%)
Scd2NP_033154.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..39
Delta9-FADS-like 96..336 CDD:239582 129/246 (52%)
FA_desaturase 101..305 CDD:278890 113/209 (54%)
Histidine box-1. /evidence=ECO:0000305 119..124 4/4 (100%)
Histidine box-2. /evidence=ECO:0000305 156..160 2/3 (67%)
Histidine box-3. /evidence=ECO:0000305 297..301 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10942
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2119
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63267
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 1 1.000 - - mtm8712
orthoMCL 1 0.900 - - OOG6_100468
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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