DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fad2 and fat-6

DIOPT Version :9

Sequence 1:NP_651966.2 Gene:Fad2 / 44006 FlyBaseID:FBgn0029172 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001255595.1 Gene:fat-6 / 178122 WormBaseID:WBGene00001398 Length:339 Species:Caenorhabditis elegans


Alignment Length:316 Identity:131/316 - (41%)
Similarity:201/316 - (63%) Gaps:14/316 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DGGLST-----------ELSNRKTTDGSKLELVWVNIVLFVILHISSLYGVWLLFTSATWTTVVL 74
            |||..|           :|.........|:|:||.|:.||..||.::..|::.|...|.|.||:.
 Worm    16 DGGPETQYLAVDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIF 80

  Fly    75 FWPTVVVTILGVSGGAHRLWAHRTFKANTPLKLIFLFLNTLAFQDAVYYWARDHRVHHKYTETDA 139
            .:...|....|::.||||||:|:::||.||:::..:.||.:|.|:.|..||||||.|||:|:|||
 Worm    81 TFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDA 145

  Fly   140 DPYNSQRGWFFAHIGWLCCRKHPEVVEKGKQIDLSDLEADPLIMFQKKYYLLLMPIICFVLPTVL 204
            ||:|:.||:||||:|||..||||:|.|:|.::|:|||.:||:::||:|:|..|:.:.||:|||::
 Worm   146 DPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVILCCFILPTII 210

  Fly   205 PMYLWGESLNVSWHVMALLRWCLSLNLIWTVNSSAHMHGMRPYDKNICPVDQGFLIFFRVGEGYH 269
            |:|.|.|:..::::.....|:|.:|:..|.:||:||..|.:|||.:|.||:..|.....||||.|
 Worm   211 PVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDSSITPVENVFTTIAAVGEGGH 275

  Fly   270 NYHHVFPWDYKSAELG-KYSQDVTTKFIEFMAYLGWAYDLKSVSLDLVKQRVQRSG 324
            |:||.||.||:::|.. ||:.  |...|:..|.||..||.|:...:::.::|...|
 Worm   276 NFHHTFPQDYRTSEYSLKYNW--TRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fad2NP_651966.2 Delta9-FADS-like 68..309 CDD:239582 111/241 (46%)
fat-6NP_001255595.1 Delta9-FADS-like 74..314 CDD:239582 111/241 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163575
Domainoid 1 1.000 284 1.000 Domainoid score I857
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I1385
Isobase 1 0.950 - 0 Normalized mean entropy S1249
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 1 1.000 - - mtm4822
orthoMCL 1 0.900 - - OOG6_100468
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X207
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.860

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