DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and NHP2

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_010073.2 Gene:NHP2 / 851319 SGDID:S000002367 Length:156 Species:Saccharomyces cerevisiae


Alignment Length:167 Identity:63/167 - (37%)
Similarity:94/167 - (56%) Gaps:22/167 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKVKVERSEDADESVVASGDVTIKEEESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKKAMKHKT 65
            |||...|..|..:...|          ::|:.::..|...|||:|.|||.||..|.||||.|.|.
Yeast     1 MGKDNKEHKESKESKTV----------DNYEARMPAVLPFAKPLASKKLNKKVLKTVKKASKAKN 55

  Fly    66 FLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRG 130
             ::.|:|:|...|||||.|:.:.|||::|.|::.|:|.:||:..:||.:.||:.|||||...||.
Yeast    56 -VKRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRP 119

  Fly   131 TVALLV-----------RQNEEYKDLYDEVKEELSAL 156
            |..:.:           .:.||||:.::||.:|:.||
Yeast   120 TSVVFIVPGSNKKKDGKNKEEEYKESFNEVVKEVQAL 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 43/105 (41%)
NHP2NP_010073.2 Ribosomal_L7Ae 41..133 CDD:426153 46/91 (51%)

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