DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and RPL8B

DIOPT Version :9

Sequence 1:NP_001261849.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_013055.1 Gene:RPL8B / 850682 SGDID:S000003968 Length:256 Species:Saccharomyces cerevisiae


Alignment Length:128 Identity:37/128 - (28%)
Similarity:61/128 - (47%) Gaps:26/128 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 AIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPA 103
            |||:..:.:..:.|.|     |:|:      ||..|.:.:...:..:.:.|.||.|::::..|||
Yeast   115 AIAEGKSKQDASPKPY-----AVKY------GLNHVVSLIENKKAKLVLIANDVDPIELVVFLPA 168

  Fly   104 VCEEKGIPYTYTPSRADLGAAMGVKRGTVALL--VRQNEE-------------YKDLYDEVKE 151
            :|::.|:||.....:|.||..:..|...||.|  ||..:|             :.|.|||||:
Yeast   169 LCKKMGVPYAIIKGKARLGTLVNQKTSAVAALTEVRAEDEAALAKLVSTIDANFADKYDEVKK 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_001261849.1 Ribosomal_L7Ae 51..146 CDD:396000 29/109 (27%)
RPL8BNP_013055.1 PTZ00365 2..251 CDD:240382 37/128 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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