DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and RPL8B

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_013055.1 Gene:RPL8B / 850682 SGDID:S000003968 Length:256 Species:Saccharomyces cerevisiae


Alignment Length:128 Identity:37/128 - (28%)
Similarity:61/128 - (47%) Gaps:26/128 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 AIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPA 103
            |||:..:.:..:.|.|     |:|:      ||..|.:.:...:..:.:.|.||.|::::..|||
Yeast   115 AIAEGKSKQDASPKPY-----AVKY------GLNHVVSLIENKKAKLVLIANDVDPIELVVFLPA 168

  Fly   104 VCEEKGIPYTYTPSRADLGAAMGVKRGTVALL--VRQNEE-------------YKDLYDEVKE 151
            :|::.|:||.....:|.||..:..|...||.|  ||..:|             :.|.|||||:
Yeast   169 LCKKMGVPYAIIKGKARLGTLVNQKTSAVAALTEVRAEDEAALAKLVSTIDANFADKYDEVKK 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 29/109 (27%)
RPL8BNP_013055.1 SNU13 2..251 CDD:455736 37/128 (29%)

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