DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and AT1G15930

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_173045.1 Gene:AT1G15930 / 838163 AraportID:AT1G15930 Length:144 Species:Arabidopsis thaliana


Alignment Length:113 Identity:24/113 - (21%)
Similarity:44/113 - (38%) Gaps:22/113 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADL 121
            ::||..:...:| ||.:....:.|....:.:.|.|....|.:..:.|:|.:..:.....||...|
plant    35 LRKARAYGGVVR-GLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTL 98

  Fly   122 GAAMGVKR-----------GTVALLVRQNEEYKDLYDEVKEELSALNI 158
            |...|:.:           |...|:|:          :..||.:||:|
plant    99 GEWAGLCKIDSEGNARKVVGCSCLVVK----------DFGEETTALSI 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 19/99 (19%)
AT1G15930NP_173045.1 Ribosomal_L7Ae 29..124 CDD:426153 18/89 (20%)

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