DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and AT5G20160

DIOPT Version :9

Sequence 1:NP_001261849.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_850856.1 Gene:AT5G20160 / 832138 AraportID:AT5G20160 Length:160 Species:Arabidopsis thaliana


Alignment Length:156 Identity:41/156 - (26%)
Similarity:65/156 - (41%) Gaps:35/156 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKD---------------------------- 73
            ||..|.|:|..:|:.....||::|..:|. |:.|..:                            
plant     6 VNPKAYPLADSQLSITILDLVQQATNYKQ-LKKGANEGIRLLLMCVCLSYLLSLMFVKLFLIYLN 69

  Fly    74 ----VQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVAL 134
                ....|.:|.:...:.|.|..|::|:.|||.:.|:|.:||.:.||:..||.|.||.|..:|.
plant    70 LFISATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIAC 134

  Fly   135 LVRQNE--EYKDLYDEVKEELSALNI 158
            .|..||  :.|.....:|:.:..|.|
plant   135 SVTSNEASQLKSQIQHLKDAIEKLLI 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_001261849.1 Ribosomal_L7Ae 51..146 CDD:396000 32/128 (25%)
AT5G20160NP_850856.1 Rpl7Ae 9..152 CDD:224277 36/143 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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