DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and AT4G01790

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_192088.1 Gene:AT4G01790 / 827957 AraportID:AT4G01790 Length:167 Species:Arabidopsis thaliana


Alignment Length:168 Identity:32/168 - (19%)
Similarity:64/168 - (38%) Gaps:46/168 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VKVERSEDADESVVASGDVTIKEEESYDDKLI--FVNAIAKPMAGKKLAKKCYKLVKKAMKHKTF 66
            :..::..:||.:       .:||.:.|:.:.:  .::.|.:.:...||:.      ..::..|.:
plant     7 INPQKKIEADSN-------PVKESDYYEGERLTHLLDLIQRGIETSKLSN------VNSLPEKIW 58

  Fly    67 LR-------NGLKDVQTRLRKGETG----------ICIFAGDVTPVDIMCHLPAVCEEKGIPYTY 114
            |:       |.:..|..|:....|.          :.|...|..|..:..|:|.:...:.:|..|
plant    59 LKKQIAIGINEVTRVLERMNPNNTSDQQQNPKQLQVVILVADCKPRMLTKHIPNLAASRNVPVLY 123

  Fly   115 T--PSRADL----------GAAMGVK-RGT-VALLVRQ 138
            .  ..||.|          ..|:|:| ||. :.||::|
plant   124 VRDNKRASLRLGELVKLKTALAIGIKARGNDLNLLLKQ 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 24/119 (20%)
AT4G01790NP_192088.1 Ribosomal_L7Ae 61..149 CDD:426153 16/87 (18%)

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