DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and RPL7A

DIOPT Version :9

Sequence 1:NP_001261849.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_000963.1 Gene:RPL7A / 6130 HGNCID:10364 Length:266 Species:Homo sapiens


Alignment Length:104 Identity:29/104 - (27%)
Similarity:46/104 - (44%) Gaps:15/104 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126
            |....||.|:..|.|.:...:..:.:.|.||.|::::..|||:|.:.|:||.....:|.||..:.
Human   131 KRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVH 195

  Fly   127 VKRGTVALLVRQNEE---------------YKDLYDEVK 150
            .|..|.....:.|.|               |.|.|||::
Human   196 RKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIR 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_001261849.1 Ribosomal_L7Ae 51..146 CDD:396000 26/98 (27%)
RPL7ANP_000963.1 PTZ00365 16..266 CDD:240382 29/104 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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