DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NHP2 and rpl7a

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_956341.1 Gene:rpl7a / 337010 ZFINID:ZDB-GENE-031001-9 Length:266 Species:Danio rerio


Alignment Length:104 Identity:28/104 - (26%)
Similarity:46/104 - (44%) Gaps:15/104 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126
            |....||.|:..|.|.:...:..:.:.|.||.|::::..|||:|.:.|:||.....:|.||..:.
Zfish   131 KRPPVLRAGVNTVTTLVESKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIVKGKARLGRLVH 195

  Fly   127 VKRGTVALLVRQNEE---------------YKDLYDEVK 150
            .|..|.....:.|.|               |.|.|:|::
Zfish   196 RKTCTSIAFTQTNPEDKAALAKLVEAIKTNYNDRYEEIR 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 26/98 (27%)
rpl7aNP_956341.1 SNU13 12..266 CDD:455736 28/104 (27%)

Return to query results.
Submit another query.